Planctopirus ephydatiae: Spb1_31570
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Entry
Spb1_31570 CDS
T06220
Symbol
bepD
Name
(GenBank) Efflux pump periplasmic linker BepD precursor
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
peh
Planctopirus ephydatiae
Pathway
peh01501
beta-Lactam resistance
peh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spb1_31570 (bepD)
01503 Cationic antimicrobial peptide (CAMP) resistance
Spb1_31570 (bepD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peh03036
]
Spb1_31570 (bepD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peh02000
]
Spb1_31570 (bepD)
01504 Antimicrobial resistance genes [BR:
peh01504
]
Spb1_31570 (bepD)
Chromosome and associated proteins [BR:
peh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Spb1_31570 (bepD)
Transporters [BR:
peh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Spb1_31570 (bepD)
Antimicrobial resistance genes [BR:
peh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Spb1_31570 (bepD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
TMCO5
Motif
Other DBs
NCBI-ProteinID:
QDV31213
UniProt:
A0A518GRI9
LinkDB
All DBs
Position
complement(3983951..3985321)
Genome browser
AA seq
456 aa
AA seq
DB search
MPSILSVIATRCLIGSTLLLMATMTAGCNHQASSSASSPSESTTPLARATAAPLERKTLV
RVVELPGRAEAFEVAPLHAKVTGYIDKVAVDIGDRVVGPHGETPGTLICQLDVPELKEEE
LQKQAMVLQAKAGVTQATAEIQVAQAGLSSAEAKVQEAEALAAREESRFARWKSEYERVT
QLAASGAVSTKVADETLAELSSADAGRKEVVAKIASAKAMMAEARAHLEKSKADAIAAGS
QLAVAEADQRRAAVMLEYTAIRAPFDGIVVERSVHPGQLVQAGSQQPALLTVMRVDPIRV
VLEVPEIDAVAISPQSQIDVKMAGTAGLIHSGTITRTSWSLNKTSRTLKAEVDVPNEAGR
VRPGQYLQVLLKVAQVENALALPKAAVVTIEKQTCCYAVDDAGVVRKIPVELGLLASNEW
EVRSGLTGTERVILLNAASFREGQTVEVVPPVAPAK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaattctctccgtgatcgcgactcgatgtctgattgggagtaccctgcttcta
atggccaccatgacggccggttgcaatcatcaggcctcctcctctgcctcttcgccatca
gagagcacaactcctctcgcgcgggccacggcggctcccctggagcggaagaccttggtt
cgcgtggtggaactccccggtcgtgcggaagcgtttgaagtggcaccgctccatgccaaa
gtcactggctacatcgacaaagtggccgtcgatatcggcgaccgtgtcgtcgggccccat
ggggaaactcccggcacattgatctgccagttggatgtcccggaactcaaggaagaagaa
ctccagaagcaggccatggtcttgcaggcgaaggccggcgtgactcaggcgaccgccgaa
attcaagttgcccaggcaggtttgtcgtcggctgaggccaaagtgcaggaagcggaggcg
ctcgccgccagggaagaatcgcgcttcgcacggtggaagtccgaatatgaacgggtcacg
caactcgcggcttccggtgccgtcagtacaaaggtggccgacgagacactggccgagctc
tccagtgccgatgccggtcgcaaggaagtcgtggccaagatcgcttccgctaaggcgatg
atggctgaggcccgtgctcacctggaaaagtcgaaggccgatgcgattgccgcgggcagc
cagttggctgtggctgaagccgatcagcgacgggccgccgtcatgctcgaatacaccgcc
attcgcgctccgttcgatgggattgtcgtcgagcgcagtgtgcatcccggtcaattggtg
caggcgggaagccaacagccagcccttctcacagtgatgcgggtcgaccccattcgagtc
gtgctcgaggttcccgagatcgatgcggtggcgatctcaccccaatcgcagatcgatgtg
aaaatggcgggtaccgcaggcctcatccattccggtacgatcacccgcacgagttggtct
ctcaacaagacctcacgcactctcaaagccgaagtcgatgtccccaacgaggccggtcga
gttcgccccggacagtacctgcaggtgctcctcaaggtagcacaggtggagaatgcgctg
gctctgcccaaggccgctgtggtgacgatcgagaagcagacctgctgctacgccgttgac
gatgcgggtgtcgtgcgaaagatccccgtcgaactggggctgttggccagtaacgaatgg
gaagtccggtctggattaacgggaaccgaacgcgtgattctgctcaacgcagcatcgttc
cgcgaaggccagactgtggaagtggtcccaccagttgcgcctgccaagtaa
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