Pedobacter aquae: FYC62_15605
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Entry
FYC62_15605 CDS
T06312
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pej
Pedobacter aquae
Pathway
pej01501
beta-Lactam resistance
pej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FYC62_15605
01503 Cationic antimicrobial peptide (CAMP) resistance
FYC62_15605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pej03036
]
FYC62_15605
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pej02000
]
FYC62_15605
01504 Antimicrobial resistance genes [BR:
pej01504
]
FYC62_15605
Chromosome and associated proteins [BR:
pej03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FYC62_15605
Transporters [BR:
pej02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FYC62_15605
Antimicrobial resistance genes [BR:
pej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FYC62_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
YknX_C
BSH_CusB
BSH_LcnD
CzcB_C
Biotin_lipoyl
Vac17
SHOCT
HH_CzcB
Chordopox_A13L
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QEK52939
UniProt:
A0A5C0VLB9
LinkDB
All DBs
Position
complement(3533363..3534439)
Genome browser
AA seq
358 aa
AA seq
DB search
MKTKYIIYVLIIGLLGYMIYNRLSKSSETKGPKGGATGTPAGGGAPIGVSGIIVKPTQFS
NIVSVSGTIEANEQVQIRSEISGLIRSINFTEGSTVNKGALLIKIDDRELQAQLAQALTR
EKLASETESRSKKLLQSEAISQEEYDNALAELRSLQAQSQLVRAQLSKTEIRAPFSGKIG
LRSISNGAYITPTTAIVNLVNTNPVKITFSVPEKYAKRVNEGSSISFTVAGSRETYSAKV
YAIEPAVDIATRTLILRARADNPNGTLLPGTFANVNLPLENIKDAILVPTEAVVPILNGK
QVFIAENGKAKAIKIESDVRTDKEVLVSAGLKAGDTVLTSGVMALKPDAPVKVSVKNK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaagtacattatttatgttttaattattggcttactaggttatatgatttat
aaccgattaagtaaatcatcagaaacaaaagggccaaaaggtggcgcaaccggcacacca
gcaggtggtggtgctccaataggtgtaagcggtattattgttaaaccaacccagttttct
aatatagtttctgtttctggaactattgaggctaatgaacaagtacaaataagaagcgag
atttctggcttaattaggtctatcaattttacagaaggttctaccgttaataaaggcgct
ttattaattaagatagatgatagagagctacaggcacaattagcacaagctttaacaaga
gaaaaattagcctcagagacagagtctcggtctaaaaaacttcttcaatcagaagccata
agccaagaagaatatgataatgcccttgccgagcttcgttctttgcaagcacaaagtcaa
ttggtaagagcccaactttctaaaacagaaattagagcacctttttctggtaaaataggt
ttaagaagtatttctaatggtgcttacattaccccaacaacagctattgtaaacctcgtt
aatacaaacccagttaaaattacgttctctgttccagagaaatatgctaaaagggtaaat
gaaggttcaagcatatcttttaccgttgccggaagcagagaaacttactcggcaaaagta
tatgctatagagcccgctgttgatatcgctaccagaactttgattttaagagctagagca
gacaaccctaatggaacgcttctgccgggtacttttgccaatgttaatttgcctttagaa
aacatcaaagatgctattttagtgcctacagaagcagtggttcctattttaaatggtaaa
caagtttttatagctgaaaacggaaaagccaaagctataaaaatagaatctgatgttaga
acagataaagaagtattagtatcagctggtttaaaagccggtgataccgtattaacaagc
ggagttatggctttaaaacccgatgctcctgttaaagtaagtgtgaaaaacaaataa
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