Pedobacter sp. KBS0701: FFJ24_004565
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Entry
FFJ24_004565 CDS
T06361
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek01501
beta-Lactam resistance
pek01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFJ24_004565
01503 Cationic antimicrobial peptide (CAMP) resistance
FFJ24_004565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pek03036
]
FFJ24_004565
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_004565
01504 Antimicrobial resistance genes [BR:
pek01504
]
FFJ24_004565
Chromosome and associated proteins [BR:
pek03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FFJ24_004565
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_004565
Antimicrobial resistance genes [BR:
pek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FFJ24_004565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
RND-MFP_C
BSH_RND
YknX_C
Beta-barrel_YknX
BSH_CzcB
Beta-barrel_AprE
HH_CzcB
Neopullulanase-like_C
CzcB_C
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
QDW24136
LinkDB
All DBs
Position
1159278..1160339
Genome browser
AA seq
353 aa
AA seq
DB search
MKKTTTLAGIAFAALGLTGCANQAKHKPVQDTLAVSVMDLRNGGDKSNHQIVYDGTLEAD
KTIELSFQVSGTILNFPARTGDHIKKGQLVATIDETVYRNQYNAQLAQVRLAKENFIRIN
EVFKKGSVAEIKMLEAKSNFEQLNAAARATYQNIAHARLYSPQNGYVGEKKAEAGAVAVP
GQSVLQLLDTRTLKVIVAVPENEVNQYKAGTHASVKIDALGTQSLKGKVTQVGVLALNGS
ANYSVTIAIDNTDGKLKPGMLCKVTFEKPAQNATSTADSVKVTVPVQSVQIDEKGNRFVY
ILNNQNKAIRKNVVVGQIYSNGVSILSGLSGNEHVITSGYQKLADQSPVTVIN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacaacaactttagccggaattgctttcgcggcgctcggtttaaccggttgt
gctaatcaagcaaagcacaaacctgttcaggatacattggctgtaagcgtaatggatcta
agaaatggaggtgacaaatccaatcaccagatcgtttatgacggaactctcgaggctgat
aaaaccatagaacttagttttcaggtttccggcacgatcttaaattttccggcacgtacc
ggagaccatatcaaaaaagggcagttggtagctacaatagatgaaacggtttaccgtaac
cagtataatgcccagcttgcacaggttagacttgccaaagagaactttatacgtatcaac
gaggtttttaaaaaaggcagtgttgccgaaattaaaatgctggaggcaaagtcaaatttc
gaacagttgaatgccgcggcaagggcaacctatcaaaatattgctcatgcccgcttatat
tctcctcaaaacggttatgtgggtgaaaaaaaggcagaagccggggcggttgcggttccc
gggcaatctgtactacagctactagacaccagaacacttaaagttatcgtagccgtaccg
gaaaatgaagtcaatcagtacaaggcaggaactcatgccagtgttaaaatcgatgctttg
ggcactcagtccttaaagggcaaagtaacccaggttggtgttttagctttaaacggaagc
gcaaattacagtgttaccattgcgatagacaataccgacgggaaactaaaaccaggaatg
ctttgtaaagtaaccttcgaaaagcccgctcaaaatgcaacctccactgctgattcggtt
aaagtcactgttccggttcaatctgtgcagatagacgaaaagggtaacaggtttgtatac
attctcaataatcaaaataaggcgatccggaaaaatgtggttgttggacagatatactcc
aatggtgtttctattctctccgggctttccggtaacgagcacgtgattacctcgggttat
caaaaactagcagatcaaagcccggtaactgtaattaattaa
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