Pedobacter sp. KBS0701: FFJ24_018185
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Entry
FFJ24_018185 CDS
T06361
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek01501
beta-Lactam resistance
pek01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFJ24_018185
01503 Cationic antimicrobial peptide (CAMP) resistance
FFJ24_018185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_018185
01504 Antimicrobial resistance genes [BR:
pek01504
]
FFJ24_018185
Transporters [BR:
pek02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FFJ24_018185
Antimicrobial resistance genes [BR:
pek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FFJ24_018185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
Motif
Other DBs
NCBI-ProteinID:
QDW26645
LinkDB
All DBs
Position
4513412..4516522
Genome browser
AA seq
1036 aa
AA seq
DB search
MSISTTSIKRPVLAIVMNLLIVLFGIIGYTFLGVREYPSIDPTVVSVRTSYPGANSDIIE
SQITEPLEKSINSIDGIRNISSSSNQGTSNITIEFNLDKNIEEAANDVRDKVSQAARTLP
KDIDGLPVVSKADANSDPILSMTIQSDKRNTLELSDFAENVIADRIQTIPGVSSVQIQGQ
RKYAMRIWMDPNKLSAYGLTSQDIVTALDNENVELPSGKITGATTELTVKTLGKLTNESQ
FNNLILKADSNQVVKLKDVGYAVLGPENEETILRESGRPMVAIAIIPQPGANYLDISKEF
YKRFDKLKADIPQDIKLKVALDNTLFIKRSVTEVAETIGLSLVLVILIIYLFFRDWAIAF
RPLIDIPVSLVFTFFIMYAFGFSINVLSLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP
FEAAIKGSNEIFFAVISISITLAAVFLPVIFLQGFVGRLFREFGVVIGAAVLVSAFVSLT
LTPMLNAYLMKKGGHKPSRFYNWTEPYFVKLNDAYESNLNKFLDKRWLSIPIILVCMGLI
FLFWKVLPKETAPYDDRSAININVTTPEGASFTYTDKFIMKLNQLVIDSVPEKNVNITIT
SPGFGGSGSVNSGFVRMGLIDPEERERSQKDIADMLTRVTKKYTEGKTIVNQQPTISVGR
RGGLPISYIIQAQNFEKLREKIPLFMDAVAKDPTFTVSDVNLKFNKPEINLTIDRDKAKN
LGVSISAIAQTLNLGLSGQRFSYFFMNGKQYQVIGQFDRGDRKDPLDLSSVYVRNDKGEL
VQLDNVVTAKEESSPPQLYRNNRFIAATVSAGLAPGKSIGEGIDAMDAISKKVLDETFST
DLSGESRDFKESSSNTFFAFGLALLLVYLILSAQFESFKDPIIIILTVPMAVAGAFLSLW
LCGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKEKGTPIPEAIREAAVSRLRPILMT
SLAIAIGALPIALALGAAAKSRMSMGTVIVGGTLFSLVLTLFVIPAIYSYWAKPYKPNKE
LKEAHRFEQEALHTEE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctcaaccacgagtataaaaaggcccgttctggccattgtgatgaacttattg
attgtccttttcgggataatcggctatacctttctcggtgtacgggaatatccatctatc
gatccaacggtggtttcggtaagaacctcttatcctggggccaactctgatattatcgaa
tcacaaattaccgagcccttagaaaaatcgatcaattctatcgatgggatcagaaatatt
tcttcatcaagtaaccagggaacgagcaatattaccatagagtttaacctcgataaaaat
attgaggaggccgcaaatgatgtgcgtgataaagtatcgcaagcggccagaactttacct
aaagatattgacggtttaccagttgtaagtaaggccgatgccaactctgatcccatttta
tcgatgacgatacagagcgataaacgcaatacattagagctaagcgatttcgctgaaaac
gtaattgccgaccgtattcaaaccattccgggggtaagtagtgtacaaatccaggggcaa
agaaaatatgccatgcgtatctggatggatccgaataaactaagtgcttacggcttaacc
tcgcaggatattgttaccgcattagacaatgaaaatgtcgagcttccatcaggaaaaatt
accggggcaactactgaactaacggttaagactttaggaaaactaacaaacgaaagtcag
tttaacaacttaatcttaaaagccgatagcaatcaggtagttaagctaaaggatgtgggt
tatgcagttttagggccagaaaacgaagaaaccattctgcgcgagtcgggcagaccgatg
gtggctattgccattatcccgcagccgggagccaattatctcgatatcagtaaagagttt
tacaaacgttttgataaattaaaagctgacattccacaggacattaagcttaaagtagcc
ttagataataccttgtttattaaacgttctgtaacagaggtggccgaaaccattggttta
tcactggtattggtaattttgatcatttacctgttctttagagattgggccattgctttc
aggccattgattgatattccggtatccttagttttcactttctttattatgtatgctttt
ggcttctcgataaacgtattgagtttactggccattgtactcgctacaggtttagtagtg
gatgatggcattgtggtaactgaaaatatcttcaaaaaggtggaagaagggatgtcgcca
tttgaggcggccattaaaggatcaaacgaaatcttttttgccgtaatttccatttccatt
acgcttgccgcagtattcctgcccgtaattttcttacagggttttgttggccgtttattc
agggaatttggggtggtaatcggcgctgccgtattggtatccgcgtttgtatcccttact
ttaaccccgatgttgaatgcctacctgatgaaaaaaggtgggcataaaccttcaaggttt
tacaattggacagagccttattttgtaaagctgaacgatgcgtacgaatcgaatttgaat
aagtttctagataaaaggtggctttccatcccgattattctggtatgtatgggcctaatt
ttcttattctggaaggttttaccaaaagaaaccgctccttacgatgatagaagtgcaatc
aacatcaacgtaaccactccagaaggtgcatcttttacctatactgataagtttatcatg
aaactgaaccaattggtgatcgattctgttccggaaaaaaatgtgaacattaccatcacc
tcaccgggttttggtggttcgggttcggtaaattctggttttgttaggatgggtttaatc
gatccggaagaacgtgaacgttcgcaaaaagatattgctgatatgcttaccagggtgact
aaaaaatataccgaaggtaaaaccatcgttaaccagcagcctaccatttccgttgggcgc
cgtggtggattacccattagttacatcattcaggcacaaaattttgaaaagctacgggag
aaaatcccattgttcatggatgcagtggccaaagaccctacatttaccgtttcggatgtg
aacctgaaatttaacaaacccgaaattaacctaaccatagacagagacaaagccaagaat
ttaggagtttcgatctctgccatcgcccaaaccttaaatcttggtttaagcgggcaaagg
ttttcgtacttttttatgaacggaaaacaataccaggtaatcggtcagtttgaccgtggc
gacagaaaagatccattagatctgagttcggtttatgttcgtaatgataaaggcgaactg
gtacagctcgacaacgtagttactgccaaagaagaaagtagtccaccgcaactgtacaga
aataaccgttttattgcggccactgtttcggcaggtttagcccctggaaaaagtatcggc
gaaggtatagatgccatggatgccatttctaaaaaagtattggacgaaaccttttcgacc
gatttaagtggagaatcgcgggattttaaggagagttcatctaacactttctttgccttt
ggtttagccctcctattggtttatttaatcctttcggcacagtttgaaagttttaaagac
ccgattatcattattttaacggtaccaatggccgttgcgggcgcatttttatcgttgtgg
ctctgcggacagagctggaatatttttagtcagatcggaaccattatgttaattggtctg
gtaaccaaaaatggtattttgattgtcgaatttgccaaccagttaaaagaaaaaggtact
ccgataccagaagccatccgtgaagctgctgtttcgcgtttgcgcccaattttaatgacc
agtttggccattgccattggtgccttacctattgccttagctttaggtgccgctgcaaaa
agcaggatgagtatgggaaccgtaattgtaggtggaacattgttctcgctggtattaacc
ttatttgtgatcccggccatttactcttattgggcaaaaccatataaaccaaacaaagaa
ttaaaagaagcccatcgttttgaacaagaagctttacatacagaagaataa
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