Pedobacter sp. KBS0701: FFJ24_023660
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Entry
FFJ24_023660 CDS
T06361
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek01501
beta-Lactam resistance
pek01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFJ24_023660
01503 Cationic antimicrobial peptide (CAMP) resistance
FFJ24_023660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_023660
01504 Antimicrobial resistance genes [BR:
pek01504
]
FFJ24_023660
Transporters [BR:
pek02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FFJ24_023660
Antimicrobial resistance genes [BR:
pek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FFJ24_023660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QDW27672
LinkDB
All DBs
Position
complement(5827334..5830516)
Genome browser
AA seq
1060 aa
AA seq
DB search
MFKKFIERPVLSTVISIIIVILGVLGLATLPVSQYPEIAPPTVQVSTSYQGANADVVMNS
VVVPLEEQINGVEDMTYMTSTASNDGTATITVNFKLGTNPDLAAVNVQNRVARATSLLPA
EVTKSGVITAKRQASNVLIFGLYSDDPSYDQKFLQNYANINIIPQIKRINGVGDASAFGT
LDYTMRIWLKPDVMATYGLVPNDINVALADQNVEAAPGQFGELGDQAFQYTLKYTGRLKD
EAQFGNIIIRTTDNGQILRLKDIARIELGAQSYASSVKFNGKQALGIAINQTAGSNAKEV
IENSIKTLDEAQKSFPKGVHYSTLVNVNDFLDASIEKVLHTLIEAFILVFLVVFIFLQDF
RSTLIPAISVPVAIIGTFFFLSLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAKLDE
GYTDARKATIDAMDDISGAIISITLVMAAVFIPVSFISGSSGVFYKQFGLTLAISIILSA
INALTLSPALCALFLKPHKEEHKKSKNFLNRFYDAFNTSFDAVTGKYKKSVGFLSRKKWI
VGLAIAFFAVVLVWTMNTTPKGFVPNEDLGTIMSDISLPAGTSQEETNIVIAKIDSIAHK
IPEIKNTLRVVGRSMISGSGSSYGMVISRLTPWDERKGRDVKTIIGELFAKTAGIKGAKI
IFFAPPTIQGFGTSGGFEFQLQDKTGGDIKKFNEVGNGFLAALSKRPEIQYASTSFNPNF
PQYQIDVNVAKVKQAGLNVSDVLGVMQGYYGGVYASNFNKFGKQFRVMFQADAQYRANEQ
TLTRIFVRNSAGQMAPVSEFITLTKVYGPQAISRFNLFTSISVTGNPNAGYSSGDALKAV
QEEAAKNLPAGYGYEFSGLSREEMAGGSQTVFIFLLCVIFVYFLLAAQYESYILPLAVLF
SLPVGLAGVFVFDKIFGVDNNIYTQITLIMLVGLLAKNAILIVEYAVDRRRKGMSIANAA
IDGATARLRPILMTSFAFILGLLPLMLSSGVGAAGNTSIGTGAVGGMLIGTIFGVFVIPA
LFIIFQSLQERISNKSPFNEGIDHEQTPEEYELATANSKH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaatttatagaaagaccggttttatcaacggttatatccatcatcatcgtt
atactcggtgttttaggtttagctacgttgccggtttcacaatatccggaaattgccccg
cccacggtgcaggtttctacttcataccagggtgccaatgccgacgtggtgatgaatagc
gttgttgttccgctggaagagcaaataaacggtgtggaagacatgacctacatgacttct
accgccagtaatgatggtaccgcgaccattaccgtaaactttaagctgggaaccaacccc
gatcttgcagccgtaaacgtacagaacagggttgcacgtgcgaccagtttattacctgca
gaggttaccaaatcgggggtaattacagctaaaagacaggcgagtaacgtattgatcttt
ggtttatatagcgacgatccttcttacgatcagaaatttttgcagaactatgcaaacatc
aacatcatccctcagattaaacgtatcaatggtgtgggtgatgcgagtgcattcggaaca
ttggattataccatgcgtatctggctaaaacctgatgtgatggcaacctacggactggtt
cctaacgatattaacgttgccctggccgatcagaatgtggaggccgctccgggtcagttc
ggagagcttggcgatcaggcatttcaatataccttaaaatatacgggtaggttaaaagat
gaggcccagtttggcaacattattatccgcactaccgataacggtcagattctccgttta
aaagatattgcaaggatagaattaggtgcacagagttatgccagttcggttaaatttaac
ggaaaacaagctttgggtatcgccattaaccaaacagcaggttcaaatgcaaaagaggta
atcgaaaattccatcaaaacccttgatgaagctcaaaaatcttttccaaaaggggtgcat
tactcaactttggttaacgtaaacgactttttggatgcatcgatagaaaaagtgcttcac
accttgatcgaagcatttattttggtgttccttgtagtgttcatcttcttacaggatttc
cgatcaaccttaattccggcgattagtgtaccggtggcaattatcggaacgttctttttc
ctgagtttatttggatttaccatcaacttactaaccttatttgccctcgtgcttgccatt
ggtattgtggtggatgatgcgattgtggtagtagaggccgtgcacgccaagctggatgaa
ggttataccgatgccagaaaggcaaccatagatgcgatggacgatattagtggagcgatt
atttcaatcactttggtaatggctgccgtatttatcccggtgagttttatctccggatct
tcaggtgtattttacaaacaatttggtttaacactggccatttccattatcttatcggcc
attaacgccttaacattaagtccggcattatgtgctttgttcttaaaaccgcataaagaa
gagcacaaaaaatctaaaaactttttaaaccgtttttacgatgcttttaatacttctttc
gatgccgtaaccggaaaatataaaaaatcagtaggcttcctgtccagaaaaaaatggatc
gttggattggctatcgctttcttcgcagtagtattggtttggacgatgaataccacacca
aaaggtttcgtaccaaatgaggatttgggaaccattatgagtgatatctcattaccagca
ggaacttcgcaagaggaaaccaatattgtaattgcaaagattgatagtattgcacacaaa
atacctgaaattaaaaacactttaagggtggtgggccgtagtatgattagtggttcgggc
agttcgtatggtatggtaatttcgcgattaaccccatgggatgaacgtaaaggccgggat
gtaaaaaccataattggcgaactgtttgcaaaaacagcaggtattaaaggtgccaagatt
attttctttgctccgccaactatccagggttttggtaccagtggcggttttgagttccag
ttgcaggataaaactggtggagatattaaaaaattcaacgaagttggaaatggattttta
gcagctttgagtaaacgtcctgagatccaatatgcttctacctcttttaacccaaatttc
cctcagtaccagattgatgtaaatgtggcaaaggttaaacaggccggcctgaatgttagt
gatgttttaggtgtaatgcagggttattatggcggtgtttatgcttcaaactttaacaaa
tttggtaaacagtttagggtaatgttccaggcagatgcgcagtaccgtgcaaacgaacaa
actttaacccgtatttttgttagaaattctgcagggcaaatggctccggtatcagagttt
attactttgaccaaagtgtatggaccacaggccatttcacgtttcaacttgtttacttca
atttcggtaaccggtaacccaaatgcaggttatagctcaggtgatgctttaaaggctgtt
caggaagaggctgctaaaaatcttccggcaggatatggctatgaattttctggtttatca
cgtgaggagatggccggcggaagtcaaacggtcttcattttcttactttgcgtaattttt
gtttatttcttgctcgccgcacaatacgaaagttatattttaccattagctgttttattc
tctttaccggttggtttagcaggtgtattcgtttttgataaaattttcggggtagataat
aacatttacacgcagattaccctgatcatgcttgtgggactactcgccaaaaacgccatt
ttgattgttgaatatgcggtagatagaagaagaaaaggaatgagcatagccaacgccgca
attgatggtgcaacagcacgtttacgtcctattttgatgacttcatttgcctttatctta
ggattattgccactgatgctatcatcaggtgtgggtgccgcgggtaatacctcaattggt
acaggtgctgttggcggtatgttgatcggaacaattttcggggttttcgtaattccggct
ctgtttatcatattccaatccttacaagagcgcatcagtaataaatcgccttttaacgaa
ggtattgaccatgaacaaacgccagaggaatatgaattggctactgcgaacagcaaacat
taa
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