Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00045
Help
Entry
SAR11G3_00045 CDS
T01465
Name
(GenBank) capsular polysaccharide biosynthesis protein CapD
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00541
Biosynthesis of various nucleotide sugars
pel01100
Metabolic pathways
pel01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAR11G3_00045
Enzymes [BR:
pel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SAR11G3_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
adh_short
NAD_binding_4
NmrA
DUF3091
KR
Motif
Other DBs
NCBI-ProteinID:
AEA80520
UniProt:
F2I241
LinkDB
All DBs
Position
complement(38814..39755)
Genome browser
AA seq
313 aa
AA seq
DB search
MKKKILITGGNGFLGLHLAQRLKKNFNIILGSRNNKNNFLVEKKTNCKTFPLDITNINSV
RDAINFCKPDIIIHAGATKFVGLSETQPFECADVNIMGSCNIARTAIDKGVKLVIGISTD
KATQPIQNFYGMSKAAMEKIFLLSNKLSKTKFLCVRYGNVAWSTGSVLPIWKEMFKKNKT
ILTTGPYMRRFFFTADDAVDLVIAALENSKKIAGKILCPEMKSSKMIDILKVWVKKFGGK
YKIINKRDGDRLDEYLIAENEKDFTKNFYHKKKKYYVIDFSKKIKNAIRQTVTSENCQKL
SEKEISQLLDLKY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaaattttaattactggggggaatggtttccttggactgcatcttgcccaa
agacttaaaaaaaattttaatattatccttggctcaagaaataataagaataattttttg
gttgaaaaaaagactaattgcaaaacatttcctttagacattactaatataaattcagtt
agagatgcaatcaatttttgtaaacctgatatcattatccacgctggagcaactaaattt
gttggattgtcagaaacgcaaccttttgaatgtgccgatgttaacattatgggctcttgc
aatatagcaaggacagctattgataaaggggtaaaattggtgattgggatttcaacagat
aaagcaacacagccgattcaaaacttttatggaatgagcaaggctgcaatggaaaaaatt
tttttactatctaataagcttagtaaaactaaatttttatgtgtacgatatggaaatgtt
gcttggtctacaggatctgttttacctatatggaaagaaatgtttaaaaaaaataagacc
atcttaaccacgggtccttatatgagaagattcttttttacagcagatgacgcagtagat
ttagttattgctgcattagaaaattctaaaaaaatagctggaaagattctctgccctgaa
atgaaatcttcaaaaatgattgatatattaaaagtttgggtgaaaaaatttggagggaag
tataaaatcataaataaaagggatggtgatagattagacgaatatcttatagccgaaaat
gaaaaagattttacaaaaaatttttatcataaaaaaaagaaatattatgtgattgatttt
tctaaaaaaattaaaaatgcaattagacaaacagtaacctcggaaaattgccaaaagctt
tcagaaaaagaaatatcgcaattgttagatttaaaatattaa
DBGET
integrated database retrieval system
