Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00753
Help
Entry
SAR11G3_00753 CDS
T01465
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00300
Lysine biosynthesis
pel00550
Peptidoglycan biosynthesis
pel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAR11G3_00753
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAR11G3_00753
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pel01011
]
SAR11G3_00753
Enzymes [BR:
pel01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SAR11G3_00753
Peptidoglycan biosynthesis and degradation proteins [BR:
pel01011
]
Precursor biosynthesis
Amino acid ligase
SAR11G3_00753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
YqeC
Motif
Other DBs
NCBI-ProteinID:
AEA81228
LinkDB
All DBs
Position
668039..669433
Genome browser
AA seq
464 aa
AA seq
DB search
MQVIQKIINSNNCSADTRTLRKSEIFFDLGSKSNKDGDYFFKALKKKPLFIITQNQKRNL
SGKNFIIVKNIYSFYVKSISLKFKKKPKYKIAVTGTNGKTSVAFFYYKILNLLGIKVGSI
GTLGVFENTKKSKGNLTTPDFFSNHKNLNHFYKKRINHSIIEASSHGLKQNRLEKINFDC
GIFTNLTHDHLDYHRTMKDYLNSKLILFKKLIKKNGFLVTGSEVLEFSLLNKISKNKKLN
LLSYGRKGNIIKIISSKPNGQFTKLKINILGKVHTLKLKLIGNFQIENFLAATLACYSSG
ISFEKIFRICSRIDNPPGRLQLFKKQNKTVIIDYAHTPDALEKTIIEIQKFFNKKINIVF
GCGGDRDHQKRKAMGKIAYKLCNKIYITDDNPRYENARKIRMQIKAGCPNAIVVPSRKQA
IKSSISMLNEEILLIAGKGHEEFQLIKNKKIAFSDHHCVTRYLK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcatacaaaaaataattaattccaataattgctccgcagataccaggactctg
agaaaaagtgaaattttttttgatttaggaagtaaaagcaataaagacggagattatttt
tttaaagccttaaaaaaaaagccattatttattataactcaaaatcaaaaacgaaaccta
tctggtaaaaattttattattgtaaaaaatatttactctttttacgttaaaagcattagt
ctgaaatttaaaaaaaagcctaagtataaaattgcagtcacaggtactaatggaaaaacg
tcagtagcatttttttattataaaatacttaatctacttggaataaaagttggttccata
ggaactttaggagtatttgagaacacaaaaaaaagtaaaggaaatttaaccactccagat
tttttttctaatcacaaaaatctaaatcatttctacaaaaagagaattaaccattcaata
attgaagcttccagtcacggcttaaaacaaaataggttagaaaagattaattttgactgt
ggtattttcacaaatttaacacacgatcatttggactaccatcggactatgaaagattat
ctaaattctaaattaatcctttttaaaaaactaattaaaaaaaatggatttttagtaaca
gggagtgaagtattggaattttccctattgaataaaatttcaaaaaataaaaaattaaat
ttattatcttacggtagaaaaggaaatattataaaaataatatctagtaagcctaatggt
caatttacaaaattaaaaataaatattttgggaaaagtccataccttgaaattaaagttg
attggaaattttcaaattgaaaattttttagctgccacacttgcttgctattcatctggt
attagttttgaaaaaatatttagaatatgctctagaattgacaatcctcccggcagattg
cagttatttaaaaaacaaaacaaaactgttattattgattatgcacacacaccagatgcc
ttagaaaaaacaattattgaaattcaaaaattttttaacaaaaaaataaatattgtcttt
ggttgtggtggggacagggatcatcaaaaaagaaaagcaatgggaaaaattgcatacaaa
ttatgtaacaaaatatatataaccgatgataatccgaggtatgaaaatgcaagaaaaata
agaatgcaaattaaagcagggtgccccaacgcaattgtagttccatctagaaagcaggca
attaaaagctctatctctatgctaaatgaagaaatcttattaattgctggaaaaggacac
gaggagtttcagttaattaagaacaaaaaaatagctttttctgaccatcattgcgtaaca
agatacttaaagtaa
DBGET
integrated database retrieval system
