Pelagibacterium flavum: OF122_01100
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Entry
OF122_01100 CDS
T08676
Symbol
leuD
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00290
Valine, leucine and isoleucine biosynthesis
pem00660
C5-Branched dibasic acid metabolism
pem01100
Metabolic pathways
pem01110
Biosynthesis of secondary metabolites
pem01210
2-Oxocarboxylic acid metabolism
pem01230
Biosynthesis of amino acids
Module
pem_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
OF122_01100 (leuD)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
OF122_01100 (leuD)
Enzymes [BR:
pem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
OF122_01100 (leuD)
4.2.1.35 (R)-2-methylmalate dehydratase
OF122_01100 (leuD)
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Motif
Pfam:
Aconitase_C
DUF5753
Motif
Other DBs
NCBI-ProteinID:
UYQ72417
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All DBs
Position
213782..214387
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AA seq
201 aa
AA seq
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MDKFTTLTGVAAPMPIINIDTDMIIPKQYLKTIKRTGLGTALFSEMRYNEDGSEKADFVL
NKPAYRDAKIVIAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIV
VTPEQLELLLDDADRGSNATLTVDLENQTISGPDGGTITFDIDPGRKHILLEGLDDIAMT
LKRDESISGYEGKMAENRPWV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttcacgacattgacgggcgttgccgcgcccatgccgatcatcaatatcgac
accgacatgatcatccccaagcagtacctcaagacaatcaagcgcaccgggcttggcacc
gcgctgttttccgagatgcgctacaatgaggatggcagcgaaaaggcagatttcgtcctc
aacaagcccgcctaccgcgatgcgaaaatcgtcatcgccggtgacaatttcggctgcggc
tcctcgcgcgaacacgcgccctgggcgctgctcgatttcggcatccgctgcgtgatctcc
accagctttgccgacatcttctacaataactgcttcaagaacggcatcctgcccatcgtt
gtcacccccgaacagctcgaacttctgctcgatgacgccgatcgcggctcgaatgccacg
ctgaccgtcgatctggaaaaccagacgatttccggccccgatggtggcacgatcactttc
gatatcgaccccggccgcaagcacatcctgctcgaagggctagacgatatcgccatgacg
ctgaaaagggacgagtcgatctcggggtacgaaggcaagatggccgaaaaccgcccctgg
gtttag
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