Pedobacter sp. PACM 27299: AQ505_04665
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Entry
AQ505_04665 CDS
T04140
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00300
Lysine biosynthesis
pep00550
Peptidoglycan biosynthesis
pep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AQ505_04665
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AQ505_04665
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pep01011
]
AQ505_04665
Enzymes [BR:
pep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AQ505_04665
Peptidoglycan biosynthesis and degradation proteins [BR:
pep01011
]
Precursor biosynthesis
Amino acid ligase
AQ505_04665
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
ALL04840
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All DBs
Position
1102479..1103936
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AA seq
485 aa
AA seq
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MQLQDVLYGIAITNLVGSTNREITALVFDSRQVIKDAVFFAIKGTLSDGHKYIENTIQAG
ASVIVCEQIPAQTVPGVVYIQVDNSSVALGEMAANYYGNPSSKLKLVGITGTNGKTTIAT
ILFKLFRTLGYHVGLISTVQNHIDDVVIPATHTTPNPIALNELLQKMMDAGCEYCFMEVS
SHAVVQHRIEGLDFVGGVFSNISHDHLDFHKTFDNYIKAKKAFFDGLPAGAFALTNLDDR
NGMVMLQNTKATKMTYALKQLADFKARVVENSFNGLHLEIDQADVFFKLVGSFNAYNLLA
VYGTAVLLGEDKLEALTALSNLTGAEGRFDYITSSNQIIGIVDYAHTPDAVQNVLSTIAD
IRKGTEQVITIIGCGGDRDKTKRPIMAQVACDWSDKVILTSDNPRSENPQTIVEEMEKGV
SPTNKRKTLSIVDRREAIKTACHLAKPGDIILLAGKGHEKYQEINGVRYHFDDKEILMEQ
LNLIS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacaagacgttttatatggaatcgccataacaaacctggttgggtctaccaat
agggagataactgcgcttgtttttgattcccgtcaggtgattaaagatgcggtgttcttt
gccattaaagggacgctttcagatggtcataaatatattgaaaatacaatacaggcaggt
gcttcggtaattgtgtgtgagcaaattcctgcgcagactgttccaggagtagtttatata
caggtagacaatagttcggtcgctttaggagaaatggctgctaattattatggcaaccct
tcttcgaaattgaaattggtaggcattaccggtacgaatggtaaaacgacgatcgcaacg
atcttgtttaagcttttccgtacgctgggttaccatgtaggattgatttctaccgtacag
aatcatattgatgatgtggtgattccggctacacatacgacaccaaacccaattgcctta
aatgaattgctgcagaaaatgatggatgctggctgtgaatattgctttatggaagtgagt
tctcatgcggtagtgcagcaccgtatcgaaggtttagattttgtaggcggtgtgttttcg
aacattagtcatgaccatttagacttccataaaactttcgacaattacattaaagctaaa
aaagcattttttgatggattgcctgcaggggcttttgcattgaccaatctggatgataga
aacggtatggtgatgctgcagaataccaaagccaccaaaatgacttatgccttaaaacag
ctggctgattttaaagcaagagtggtagaaaatagcttcaatggtttacatctggagatt
gatcaggcagatgtattctttaaactggtgggttctttcaacgcatacaacttgcttgcc
gtttacggtactgcagtattgttaggggaagataaactggaagcattaaccgcgctgagc
aaccttacgggagccgaaggcaggtttgattacatcacctcgagtaaccagatcatcggg
attgtagattatgcacatacaccagatgcagtgcagaatgtattgagtaccattgccgac
attagaaaaggcacagaacaggtgattacgatcatcggttgtggtggtgatagagataaa
acaaaacgcccgattatggcacaagtggcctgcgattggagtgataaggtgatcctgact
tcggacaatccaaggtcggaaaatccgcaaacgatagtagaggaaatggaaaagggcgta
tcgccaacaaataagaggaagacgttgagtatagtagatagaagagaagcgattaaaacg
gcttgccatttagcaaaaccaggagatattatcctgctggctggaaaagggcatgagaag
tatcaggaaatcaatggcgtgaggtatcatttcgatgataaggaaatattaatggaacaa
ttaaacttgatcagctaa
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