Pedobacter sp. PACM 27299: AQ505_07690
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Entry
AQ505_07690 CDS
T04140
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep01501
beta-Lactam resistance
pep01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AQ505_07690
01503 Cationic antimicrobial peptide (CAMP) resistance
AQ505_07690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pep03036
]
AQ505_07690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_07690
01504 Antimicrobial resistance genes [BR:
pep01504
]
AQ505_07690
Chromosome and associated proteins [BR:
pep03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AQ505_07690
Transporters [BR:
pep02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AQ505_07690
Antimicrobial resistance genes [BR:
pep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AQ505_07690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
YknX_C
HH_EMRA
Biotin_lipoyl
HH_CzcB
BSH_YknX
HH_AprE
Beta-barrel_RND_2
CzcB_C
BSH_CzcB
HH_YBHG
OEP
HH_AAEA_pHBA
FliJ
Motif
Other DBs
NCBI-ProteinID:
ALL05379
LinkDB
All DBs
Position
complement(1820761..1821945)
Genome browser
AA seq
394 aa
AA seq
DB search
MFFPQNLRNNTRYFLLLSLLFPALFLSSCGSKAGQEQAGGTPPPAPEIPVIAVLEQAAVT
FNEYSAAIEGRVNVDIRPQVDGYLDKIFVDEGAYVKAGQPLFKINDRVYQEQLNTANAAM
EAAKATLRTAQIEVNKIKPLVQNKVVSEVQLSTAEANYNQAQAAVSQAKSTIASAKINIG
FTLIKAPISGFIGKIPKRVGNLISKGDQEPMTTLSDTKDVYAYFSMSEPAFLQFNAQIKG
ANMTEKLKKLPPVTLLLADGTTYPQKGRIQLVDGQFDKNTGSISLRAMFPNPQGLLRSGN
TGKIRLEEQHEQVVMVPKAATMDVQDKIFVYLVGKGNKLERRAILISGKSGNNYLVKDGL
KKGETIVYSGLDGLTEEAEIKPKPLNADSVYRAQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcccccaaaatcttagaaacaatacccgatatttcttgctattgtccctgctt
ttccctgcattgtttttaagcagctgcggatcgaaagccggacaggaacaagccggcgga
actccgcctccagcaccggaaatcccggtgatcgctgtgctggaacaagctgcggttacc
tttaatgaatatagtgctgccattgaaggcagggtaaatgtagacattcgcccgcaggta
gatggttacctggacaaaatctttgtggatgaaggtgcctacgtaaaagctggtcagcct
ttgttcaaaatcaacgatcgtgtgtatcaggaacagctgaatactgccaacgcagctatg
gaagccgcaaaagcgaccttgcgtactgctcagattgaagtgaataaaatcaaaccttta
gtgcaaaacaaagtggtttcggaggtacagttgagtaccgcagaagcaaattacaatcag
gcacaggctgcggtatcacaagcaaaatcaaccattgcctcggcaaagatcaatatcggt
ttcacattgattaaagccccgatctctggctttattggtaaaattccaaaaagagtgggc
aacctgatcagcaaaggcgatcaggaacccatgactaccctttccgacacgaaagatgtg
tatgcttatttctccatgagtgaacctgcttttcttcagttcaatgcacaaattaaaggt
gcaaacatgacggagaagctgaaaaaacttcctccggtaaccctgctgcttgccgatgga
actacttatcctcaaaaaggaagaattcaactggtagatggtcagttcgacaaaaacacc
ggatcgatcagtcttagggcaatgttcccgaatcctcagggattactacgttctggaaac
accggaaaaatccgtttggaagagcagcatgaacaagtagtgatggtccctaaagctgct
acaatggatgttcaggataagattttcgtctacctggtcggaaaaggaaataagttagaa
cgtagagcaatccttatttctggcaaaagcggcaacaattacctggttaaagatggcctt
aaaaaaggagaaaccattgtgtattcaggcctggatggtttaacggaagaggctgaaatt
aagccaaaaccattaaatgccgatagcgtttaccgcgctcaataa
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