Pedobacter sp. PACM 27299: AQ505_11355
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Entry
AQ505_11355 CDS
T04140
Name
(GenBank) phytoene dehydrogenase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00906
Carotenoid biosynthesis
pep01100
Metabolic pathways
pep01110
Biosynthesis of secondary metabolites
Module
pep_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AQ505_11355
Enzymes [BR:
pep01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
AQ505_11355
1.3.99.28 phytoene desaturase (neurosporene-forming)
AQ505_11355
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
AQ505_11355
1.3.99.31 phytoene desaturase (lycopene-forming)
AQ505_11355
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Gene cluster
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
GIDA
HI0933_like
Pyr_redox_2
Pyr_redox
Thi4
FAD_binding_2
AlaDh_PNT_C
MCRA
FAD_binding_3
3HCDH_N
MurD-like_N
FAD_oxidored
NAD_binding_9
Pyr_redox_3
UDPG_MGDP_dh_N
FMO-like
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
ALL06036
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Position
complement(2696548..2698047)
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AA seq
499 aa
AA seq
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MSTTTNKAQTKIAIIGAGFAGISAAAYLSKQGYQVDVYEKNADIGGRARQLITENGYLFD
MGPSWYWMPEVFEKFFNDFGYKAEDFYELQLLDPGFSVVFGADDVLNIPANFEELCALFE
SIETGSAKKLKEFLAEAAYKYNIGMGKLVYKPGLSLMEFADVDLIKGLFKLQVFTSFSAH
VKKYFKDPRLIALMEFPVLFLGAMPEDTPALYSLMNYAGLKLGTWYPKGGFGKVIKAMKT
IAEMQGAKFHTNAAVSAIDVEENQVVSLTTESGTHHYDGLIAAADYHHVEEKLLNAAQRN
YSEKYWDNRVLAPSCLIFYLGVNTKVARLNHHTLFFDEDLKKHSREIYKQAQWPTKPLFY
VCCPSVTDPSVAPAGHENLFVLMPLATDIKDPEAIREQYFDLIMDRLEAYTGTPIRKHLD
YKKSYCVSDFITDYNSFKGNAYGLANTLMQTANLKPTLKNKKINNLFYAGQLTVPGPGVP
PSIISGNLAAQQLIKHLNK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactacaacaaataaagctcaaactaaaatcgccatcattggtgcaggttttgcc
ggaatcagtgcagcagcttacctgtcaaaacaaggttaccaggtggatgtttatgaaaaa
aacgcagacattgggggaagggcacgtcagctgattacggagaacggctacctgtttgac
atggggccaagctggtattggatgcccgaagtatttgaaaagttcttcaatgatttcggc
tataaagcagaagatttttatgagctgcaattgcttgatcctggctttagtgtagttttc
ggcgctgatgacgtattaaatattccggcaaatttcgaagaattgtgcgcgttatttgaa
tccatagaaactggcagtgctaaaaaactaaaggaatttttagctgaagccgcctataaa
tacaacattggaatgggcaaactggtgtacaaacccggactttccttaatggaatttgcc
gatgtagacctgatcaaaggcttgtttaaactacaggtatttacctcttttagtgcgcac
gttaaaaaatatttcaaagatccccggctcattgccttaatggaattcccggtgctgttt
cttggcgcaatgccggaagatactccagcactatacagtctgatgaactatgcagggctg
aaattaggcacctggtacccaaaaggtggctttggaaaagtgatcaaagccatgaagacc
attgcggagatgcagggtgctaaatttcataccaatgccgccgtatccgcaattgatgtg
gaggaaaaccaagtagtcagtttaactacggaaagcgggactcatcattatgatggcctg
atcgctgctgcagactaccatcatgtggaagaaaaactgctaaatgctgcacagagaaat
tattcagaaaaatattgggacaaccgagtacttgcgccctcctgcctcatcttctattta
ggggtaaacactaaggtcgcgcgcttaaatcaccatactttattctttgacgaggattta
aaaaagcattcacgagagatctataaacaagcgcaatggcccacaaaaccattattctat
gtctgctgtccaagtgtcaccgatccatcggtagccccagctggtcatgaaaacttattt
gtattgatgccgcttgccacggatatcaaagatcctgaagccatccgtgaacaatacttt
gatttaattatggaccgcctggaagcttataccggaacaccaatacgcaaacacctggat
tataaaaaaagctactgtgtcagtgattttattaccgattacaattcttttaaaggaaat
gcgtacggcttagcgaacacgctgatgcagactgcaaacctgaaaccaacccttaaaaat
aaaaaaatcaacaatcttttttatgccggacaacttactgtgcccggaccaggagttccg
ccatcgattatttctggaaaccttgccgcccaacaattgataaagcacctaaacaaatag
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