Pedobacter sp. PACM 27299: AQ505_24220
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Entry
AQ505_24220 CDS
T04140
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AQ505_24220
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pep01007
]
AQ505_24220
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pep03016
]
AQ505_24220
Enzymes [BR:
pep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
AQ505_24220
Amino acid related enzymes [BR:
pep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AQ505_24220
Transfer RNA biogenesis [BR:
pep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AQ505_24220
Prokaryotic type
Other AARSs
AQ505_24220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
DUF269
Cas6b_C
Motif
Other DBs
NCBI-ProteinID:
ALL08306
UniProt:
A0A0N7JFN7
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All DBs
Position
5751780..5755175
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AA seq
1131 aa
AA seq
DB search
MYREFKQLELAKIGKEILEFWKAENIFEKSISTRSKANPFTFYEGPPSANGMPGIHHVMA
RAIKDIFCRYKTLKGFQVKRKGGWDTHGLPIELAVEKKLGITKEDIGKKISVEEYNTACK
EEVMKYTDVWNDLTEKMGYWVDLENPYITYESEYIESLWSILKSFYDKGLLYKGYTVQPY
SPAAGTGLSSHELNQPGTYKMLKDTSITAQFFLKKGQQHPLMADLFENEQEETAIIAWTT
TPWTLPSNCALAVGEKITYVKVKTFNPYTFLPVSVILAKDLVGKHFKADAAAIALEDYKG
GDKLVPWTIVKEFTGKDLIGLHYHQLMPYVTNEDLEANAFRVIPGDFVTTEDGTGIVHTA
SIFGADDFRIAKEAGVPSVLVKDENGNDAPLVDKQGKFVKEVTDFAGRYVKEEYYSDEER
AAADFKPTDVLIAIKLKEDNKAFDVKKYEHSYPHCWRTDKPILYYPLDSWFIRTTAVKEK
MVALNKTINWKPEATGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRTEDGKQEKCIGSIE
ELNAEIQKSVAAGYMEAGFELKDMHRPYVDDVILTADNGEKMVRELDLIDVWFDSGAMPY
AQWHFPFENKEEFANSYPADFIAEGVDQTRGWFFTLHAIAVMLSESSEEIKAINEKVGNP
GVAFKNVVSNGLVLDKNGNKMSKRLGNGVDPFATIDTYSADATRWYMISNASPWDNLKFN
TDGIDEVRRKFFGTLYNTYSFFALYANIDKFVIDEENQTPIAERSELDRWILSLLQTLIA
EVDESYQSYEPTKASRAIQTFVDEHLSNWYIRLSRRRFWKGEMTADKKAAYETLYTCLTS
IAQIMSPVAPFFADWLYQNLSVTVQNNATESVHLTLWNEADRALIDTALNERMELAQNIS
SMVLSLRKKSSINVRQPLAKILIPVLDKKFAEQVELVKELILSETNIKTIEYITDAAGFI
KKKIKPNFKALGPKVGKEMKMVAELITNMSPEELTAFEATGEYQVPNTAYVVQLTDVEII
AEDIPGWQVTNLGSLTVALDVTITEKLKQEGLSRELINRIQNLRKELNFEVTDRITVSLQ
NHNLIANAVAQNKTYICSEILADKINLIDKLEGGNKIVIDDVELDISIAKQ
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtatagggaatttaaacagctggaactagctaaaataggaaaagaaatacttgaattt
tggaaagcggaaaatatctttgagaagagcatttctacgcgttcaaaagcgaacccattc
acgttttatgaaggcccgccttctgcaaatggaatgcctgggatccaccatgtgatggca
cgtgcgattaaagatattttttgccgttataaaacattaaaaggctttcaggtaaagcgt
aaaggcggatgggatacccatggattgcctattgagcttgctgtagaaaagaaattaggc
attactaaagaagacatcggtaagaaaatttccgtggaagaatacaatactgcctgtaaa
gaggaggtgatgaaatacactgatgtatggaatgacctgaccgaaaaaatgggctattgg
gtagacctggaaaacccctatatcacttacgaaagtgaatatattgaatccttatggtcg
atcttaaaatcgttctacgacaaaggacttttatacaaaggatatactgtacaaccatat
tcccctgctgcaggaacaggattgagttcgcatgagctgaaccagccgggtacgtataag
atgctgaaagacacgtcaattaccgcccagttttttcttaaaaagggtcagcagcatcca
ttgatggcagatctttttgaaaatgagcaggaagaaaccgcgattatcgcctggaccact
accccatggactttgccttctaactgtgcattggccgttggcgagaaaatcacctatgtg
aaagtgaaaacattcaacccctatactttccttccggtaagtgtaattcttgccaaagat
ctggtaggaaaacactttaaagcagatgctgcagcaattgctttggaagattataaaggt
ggcgacaaactggttccatggactatcgttaaagaatttacaggtaaagacctgattggt
ttgcattaccatcaattgatgccttatgtgactaatgaagacctggaagcaaatgctttc
cgtgtaattcccggtgattttgtaactacagaagatggtacaggtatcgttcacactgct
tctatcttcggtgcagacgattttcgtatcgccaaagaagcaggtgttccttccgtattg
gtgaaagatgaaaatggcaatgatgcgcctttagtagacaaacagggtaagtttgtaaaa
gaggtgacggatttcgccggtcgttatgtaaaagaagaatactattcggacgaagaacgt
gctgctgctgattttaaaccaacagatgtactgattgccatcaaattaaaagaagacaac
aaagcattcgacgttaagaaatatgaacacagttaccctcattgctggagaactgacaaa
ccaatcctatattatcctttagacagctggttcatcagaacgacagcggtaaaagagaaa
atggtggctttaaataaaaccatcaactggaaacctgaggctaccggaacaggccgtttt
ggcaactggctggaaaacctggtagactggaatctttcgcgttcgcgctattggggtact
cctttaccaatctggcgtacagaagatggtaagcaggaaaaatgtatcggttctatcgag
gaattgaatgcagaaatccagaaatctgttgctgcagggtatatggaagctggttttgag
ctgaaagatatgcaccgtccgtatgtggatgatgtgatcctgacggctgataacggcgaa
aaaatggttcgtgaattagacctgatcgatgtttggtttgatagcggtgccatgccttat
gcacaatggcatttcccttttgaaaacaaagaagaatttgcgaattcatatcctgctgat
tttatcgctgaaggtgtagatcagacccgtggctggttctttactttacatgccattgcg
gtgatgttaagcgagtcgagcgaagaaattaaagcgatcaacgaaaaggtaggcaatccg
ggtgtagcgtttaaaaacgtggtatccaatggattggtgctggataaaaacggcaacaaa
atgtctaagcgattaggcaatggcgtagatccttttgctacgatcgatacttatagtgct
gatgcaacgcgttggtacatgatcagcaatgcttccccttgggacaaccttaaatttaat
accgatggtattgatgaggttcgccgtaagtttttcggaacgctttacaacacctattct
ttcttcgctttatatgcgaacattgataagtttgtgatcgatgaggaaaaccaaacacca
attgcagaacgcagtgaattagaccgctggatattatccttattacagacgctgattgcg
gaagtagacgagagttaccaaagctacgagccaacaaaggcttcaagagctatccagaca
tttgtggatgagcatttgagtaactggtacatccgcttgtcgcgtcgccgtttctggaaa
ggtgaaatgactgcagataaaaaagcagcttatgaaactttatatacttgtttaacgagc
atcgcacagatcatgtcgccggtagcaccattctttgcagattggctgtatcagaactta
tcagtaactgttcaaaacaatgctactgaatctgtacacttaaccttatggaatgaagca
gatcgtgctctgattgatacagcattaaacgagcgcatggaactggcacaaaacatctct
tcgatggtgctttccctacgtaaaaagagcagcattaatgtgcgtcagccattggcgaag
atcttaattccggtattggacaagaaatttgcggagcaggtggaattggtgaaagagctg
atcttgtcggaaacgaacatcaaaacgattgagtatatcactgatgctgcaggtttcatc
aagaaaaaaatcaaacctaactttaaagctttagggcctaaggtaggtaaggaaatgaaa
atggtggctgagctgatcactaacatgagtcctgaggaattaactgcttttgaggctact
ggtgaataccaggttccaaacacagcgtatgttgttcaattgactgatgtggagatcatt
gcggaagatattccgggatggcaggtaaccaatctgggcagcctgaccgttgctttagat
gtaaccatcactgaaaaattgaagcaggaaggtttgtctcgtgagctgattaatagaatt
caaaatctacgaaaagaattaaactttgaggttacggatcgcattacagtctctttacaa
aaccataatctaattgcaaatgcagtagctcaaaataaaacctacatttgttcagaaatt
ttagcggataaaattaatttaatagataaattagaaggtggaaacaaaatcgtcattgat
gatgttgaactagatatttcgatcgcaaaacaataa
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