KEGG   Phalaenopsis equestris: 110019152
Entry
110019152         CDS       T05601                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
peq  Phalaenopsis equestris
Pathway
peq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110019152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:peq03021]
    110019152
Enzymes [BR:peq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110019152
Transcription machinery [BR:peq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110019152
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 110019152
NCBI-ProteinID: XP_020572386
LinkDB
Position
Unknown
AA seq 1503 aa
MPIMADCPTVFETIPSARLNGIKFELMTGEEMERFSSVSILDVNDLVDAKLGLPSTSSQC
STCGSKSVKDCDGHFGVIKLPISVYHPYFLPEIVHILNQICPGCKSVRHESQIKRRLFHT
VRKKLLRYIRLSLSRLTRKVLSGDLKDDISYLKIRKHISKEVGTIGNKSGCKYCASSSFE
WYPTLKFKISNKDFQGRKGLSILAEVNAKLPKKFQNRSFGELLPKDFWNFVPKYHKQQCL
NSNSIFLSPWQVFSLLKQLDRDFINQFVSRRELLFLSCLPVTPNSHRIVEVTHALTDGSR
ISFDDRTKIYKRMADLGKKLDGVLQHPQFRALTSSFITDRVRECFVSSKLRSRALLSGDS
PSSVSGMKWLKEVVLSKRTDYAFRMTMVGDPKLRLDEVGIPSDIARSLFVTEFVTKFNLE
KLRTSQRIRLWKDQRLIFNHKSNELQLGDRIERPLADGDVVLVNRPPSVHQHSLIALSVR
ILPTDSVVSINPLICSPLLGDFDGDCLHGYVPQSIHCRIELQELVSLDSQLLNGLDGRNL
LSLTHDSLTAAYFLTSKDAFLNKFEIQQLEMLCHHQSPVPAIVTGPNPKSALWTGHQLLN
MLFPPLVDLYESSRTLRHFKGELLFEPQFLCWLQNKPNSIYYWMSTNYGKKALDYLFSAQ
EVLCEYLTMRGFTVSLGDIYLTTDSYTRMKMIDEVNFGLQEAADSCRAREHFLNKFDGSL
NSIDDVEDTFLSLKLQKLKSSRTRLIQESIAAFKNIFCDIQYAILNYVGNNSSMLAMINA
GSKGSLLKLVQQGACLGMQFSASEIPFNIPRVLSCEHWNQQKKLHQHRVLDDAEGGSIQK
HFAVIKSSLLDGLNPLECFFHALSGRANLFSENAQLPGTLSRKLMFYMRDLYVAYDGSVR
NVYGEEIVQFCYNFPENGKFCKISSEREVSRSVPGGQPVGSMASCSLSETAYGALECPVN
PFCPSPLLNFKALLERSTGTISGVHTASLFLSNKLRRLRYGFEHAALVVKSQLGHVLFAE
IVRTITILYARKDTQRVGLSPWVIHFYVDKESMSSRRLEAQNVKDQLVRSYEKKAALNDS
LPKLFIESKYHLPDDKQEKSGAMNCITLAVEFADSPILLDTLRHLVLPCLLKSLIKGFSE
FEKVDILWDDTQKNSNGELFLKVTMSETCSPGKFWNSIQNACVPIMDLIDWNRSHPNDIC
NISSMFGISAAWIIFLRSLKSTALDVGRNVRQEHLKIVADRLFFSGEFYGLSKKGLKMQK
DFTANSSPFTFACFSNPASCFVDAAKQDCTDSLHGTIDAISWGKESPIGTGGPFKIMYSG
KVSNPKEGVGIYSMLQCQDIIDKRMEEPLHAGDDICKSKKWDENCCTEYEGHTDFAFQKG
LGARQNGSYSHIVNMEFSLRAILLKYPINRYVTAADREILMKALARHPSCDAKIGSGVQD
IMVGYSSEHKGSKCFILVRKDGTTEDFSYHKCVAGAAAQISPECAAMFEKRYHRRFQRSK
PMP
NT seq 4512 nt   +upstreamnt  +downstreamnt
atgcctattatggcagattgcccaaccgtatttgaaactataccctcagcgcgtttaaac
ggcattaagtttgagttaatgaccggagaggagatggagcggtttagcagtgtcagtatt
cttgacgtgaatgatttggtggatgctaaattgggtttacctagcacaagttctcagtgc
tcaacatgtggttcaaaaagtgtcaaagattgtgatggacattttggtgttatcaagctg
cctatttctgtttatcatccctactttcttccagaaattgttcatattcttaaccaaatc
tgccctggatgcaaatccgttcggcatgagtcacaaattaagagacggctctttcatacg
gttcggaagaaattactaagatatattcggttgagtctatcacgtttgactagaaaggtt
ctatctggtgatctgaaggatgatatttcatacttaaagatcagaaagcatatatcaaag
gaagtgggaacaattggaaacaaatcaggttgcaaatattgtgctagcagttcttttgag
tggtaccctactttaaaatttaagatatccaataaagattttcaagggaggaaagggctt
tcaattttggcagaagtaaatgcaaagttgccaaaaaagtttcagaacagaagctttggc
gaattattgccaaaggacttttggaattttgttcccaagtaccataaacagcaatgtctg
aattcgaacagcatatttctttcaccttggcaggtatttagtttactgaaacaacttgat
cgagatttcatcaatcagtttgtttctaggagggaattgctatttttatcttgtctacct
gttactcctaattcccatagaattgtggaagtaacacatgcattaactgatggatcaagg
attagttttgatgatcgaacaaaaatttataaaagaatggctgatttgggcaaaaagctt
gatggtgttctgcagcatcctcagtttagagctttaacatcctccttcataactgataga
gttcgagaatgctttgtgtcttccaagttaagatcccgtgcattattatctggagattct
ccttccagtgtatctggaatgaagtggcttaaggaagtagttctcagcaagagaacagat
tatgcgttccgcatgacaatggtcggtgatccaaagctaaggttagatgaagttggaatt
ccatctgacatcgctagaagtctttttgtcactgagtttgtcaccaaattcaatttggaa
aagctgagaaccagccaaagaattcgtctgtggaaagatcagaggttaatctttaatcat
aaatcaaatgaacttcagcttggtgatagaattgaaagacctttggcggatggcgatgtt
gttctagtaaacagacctccatcagtgcatcagcattctttgattgcactatcagtcaga
attcttccaactgattcagttgtttcgataaatccattaatttgttctcctttgcttggc
gattttgatggagactgtctacatggctatgttccgcaatctatccattgcagaatagag
cttcaggagcttgtcagtttggattctcaactattaaatggactggatggtcgaaaccta
ttatcgcttactcatgacagcttaactgcagcatattttttaacttctaaggatgctttc
cttaacaagtttgagattcaacaattagaaatgttatgccatcaccaatcgcctgtgcct
gcaattgtaactggtccaaatccaaagagtgctctctggactggacatcagttactaaac
atgctttttcctcctttggtggatctttatgaatcttctaggactcttcggcattttaag
ggtgaacttctgtttgaaccacaattcttgtgctggttgcagaataaacctaacagtatt
tattactggatgtccacaaattatggaaagaaagcccttgactatctcttttctgctcaa
gaagttctttgtgagtacttgacaatgagaggttttactgtgtctttgggtgatatttac
ctcaccacagattcttatactagaatgaagatgattgacgaggtgaacttcggtttgcaa
gaagcagcagactcatgtagggccagagagcattttttgaacaagtttgacggttcttta
aactctattgatgatgtagaagacactttcctttctctaaagctccaaaagttgaaatca
tctagaacacggctaattcaagaatctattgctgcatttaaaaacatattctgtgatatt
caatatgccatacttaattatgtagggaataatagctcaatgttggcgatgataaatgct
ggaagcaagggtagtttgctgaagttagttcaacaaggtgcatgcctgggaatgcaattt
tcagctagtgaaataccattcaacatacccagggttctttcatgtgaacattggaaccaa
cagaagaaactccatcagcatagagtacttgatgatgccgaaggtggaagcattcagaaa
cattttgctgtaattaaatcttctttgcttgatggtctgaacccattagaatgttttttc
catgctttatctggtcgtgcgaatctcttcagtgaaaatgctcaacttccaggaactttg
agcaggaaacttatgttttacatgcgggatttgtatgttgcctatgatggaagtgtgagg
aatgtttatggagaggaaattgttcagttttgctataattttcctgaaaatggcaagttt
tgcaaaatctcatctgaaagagaagtttcgagaagcgttcccggtggtcaacctgttggc
tcaatggcttcttgttccttatcagagacagcatacggagccttggaatgcccagtgaat
ccattttgtccatccccattattgaattttaaggctttactagaaaggagtactggtaca
atatctggcgtccatactgcatcactttttttatcaaataaattaagaaggttaagatat
ggctttgagcatgcagccttggtagtgaagagtcagcttggacatgttctttttgctgag
atcgtcagaaccataacaattctttatgcgaggaaggacacacaacgcgtaggtttgagc
ccctgggtcatccatttttatgtagacaaagaaagcatgagtagtagaagattagaagca
caaaatgtcaaggatcaacttgttagaagttatgaaaagaaagcagcacttaatgattca
ctccctaagctatttatagaaagcaagtatcatctgccagatgataaacaagagaaatca
ggtgccatgaactgtattacacttgctgtcgaatttgctgactcacctatattgttggat
acgttaagacacttggtgttaccatgtcttctaaagtcacttatcaaaggattctctgag
ttcgaaaaggttgatattttgtgggatgatacccagaaaaactctaatggcgaacttttt
ctaaaagttactatgtcggaaacttgctcaccggggaaattttggaattctattcaaaat
gcctgtgtccctataatggacttgattgattggaaccgtagtcacccaaatgacatatgc
aatatttctagcatgtttgggataagtgccgcatggattattttcttaagatcattgaag
tcaaccgcacttgatgtaggaaggaacgtacgtcaagagcacttgaagattgttgcagac
cgtctttttttcagtggggagttctatggattgagcaaaaaagggttaaagatgcaaaag
gactttaccgcaaattcttcacctttcactttcgcatgcttttctaatccggcgagttgc
ttcgttgatgctgctaagcaagattgtactgatagtcttcacggtaccattgatgctatt
tcgtggggaaaagagtctccaattgggacaggtggaccatttaaaatcatgtactctgga
aaggtatccaatcccaaggaaggtgtgggtatatattcgatgcttcagtgccaggatatc
attgacaaaaggatggaagagccactacatgcaggtgatgatatttgtaagtctaaaaaa
tgggacgaaaactgttgcacggaatatgaaggacatacagattttgcattccaaaaaggg
ctcggtgcccgtcagaatggctcatattctcatattgtgaatatggagttttcattgcgt
gcaatattactcaaatatccaattaacagatatgttaccgccgctgacagagaaattctc
atgaaggctttggctcgccatcctagttgcgatgctaaaattggaagtggagttcaagat
attatggttggatatagctccgaacataaaggatccaagtgttttattttggtgaggaag
gatggaactactgaggacttctcctatcacaaatgcgttgctggagctgcagctcagatc
tcccctgaatgtgcagcaatgtttgaaaaaaggtaccatagacggtttcaaaggagcaag
ccgatgccatga

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