Phalaenopsis equestris: 110024355
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Entry
110024355 CDS
T05601
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
peq
Phalaenopsis equestris
Pathway
peq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110024355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peq03041
]
110024355
Spliceosome [BR:
peq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110024355
Complex C
U5 SnRNP specific factors
110024355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Septin
Ras
Motif
Other DBs
NCBI-GeneID:
110024355
NCBI-ProteinID:
XP_020579934
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MDDNLYDEFGNYIGPEIESDRDSDGDEDSNDAADKSPGGESFHSDDDGGSPISAANGWIT
STAGGTDDMDTDPSTSQIVLAEDKKYYPTAEEVYGDGVETLVMDEDEQPLEQPIIKPVRT
IKFEVSAKESSTYVSTEFLLGLASNPALVRNVALVGHLQHGKTVFMDMLVEQTHGISTFD
TERERHMRYTDTRIDEQERQISIKAVPMSLVLEDSNAKSYLCNIMDTPGHVNFSDEMTAA
LRLADGAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELRLPPNDAYFKL
RHTLEVINDLISSFSTTAGGTQIIDPTAGNVCFASGSAGWSFTLQTFAKLYVKLHGIPFD
FLKFASRLWGDIYYHPDRSFKKKPPAGGGERSFVQFILEPLYKIYSQVIGEHKRSVESTL
AELGVTLSNVAYKLNVQPLLRLACSSVFGSATGFTDMLVQHIPSAKDAAAKKVEHIYTGP
QDSYVAEAMKDCDPSGILMVNVTKLYPKSDCSVFDAFGRVYSGSIQTGQTVRVLGEGYSP
DDEEDMTIKEVSKLWVYQARYRIPVSKAPAGSWVLIEGVDASIMKTATLCPLDMDDDIYI
FRPLRFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGEIY
LDSIMKDLRELYSEVEVKVADPVVTFCETVVESSSMKCYAETPNKKNKITMISEPLERGV
AEDIENGVVSIDWSQKKIGDFFQKRYEWDLLSARSIWAFGPDKQGPNILLDDTLPSEVDK
NLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILDASIASEPLHRGGGQIIPTARRVA
YTAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPAYIVKAFLP
VIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVK
TRRRKGMSEDVSISKFFDESMMNELALQDAELHLQMT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaacttgtacgacgagttcggcaactacatcggccccgagatcgaatctgat
cgagactccgacggtgatgaagactctaacgatgccgccgacaagtctcccggcggcgaa
tcttttcattccgacgatgacggtggctcacccatctctgctgccaatggttggattacc
tccactgcaggcggaaccgatgatatggataccgatccttccacttcgcaaatagttctt
gcggaggacaagaagtactaccccacagccgaggaggtctatggagacggtgtcgaaacc
ctcgtgatggatgaggacgagcagccccttgagcagcctataatcaagcctgttcgtacc
atcaagtttgaggtcagcgccaaggagtcttccacttatgtatcgaccgagtttcttctc
ggtcttgcctccaaccccgctcttgtccgtaatgttgcgcttgttggtcatctccaacac
gggaagaccgtgtttatggacatgcttgtcgaacaaacacatgggatttcgacatttgat
acggagagggaacggcacatgaggtacactgatactaggatcgatgagcaggagaggcag
atatccatcaaggctgtgcccatgtcccttgtgctagaagatagcaatgctaagtcctat
ctttgcaatataatggatactccggggcacgttaacttctctgatgagatgacagctgca
ctacggcttgcagatggcgcggtactaatcgtggatgctgctgaaggggttatggtaaat
actgagcgggctatacgacatgctatacaagaaaggcttcccattgtagttgtgataaat
aaggttgacaggcttattacagaactaaggctgcctccaaacgatgcttattttaagttg
cgccatacattggaagtaatcaacgacttgatctcatccttctccaccactgccggaggc
acccagattatcgacccaactgctggaaacgtttgcttcgccagtgggagtgcgggatgg
tctttcaccttgcagacgtttgctaaactatacgtgaagcttcatggcatcccattcgac
tttctaaaatttgcttcacgtctatggggagatatttactatcaccctgaccggtccttt
aaaaagaaacccccagcgggcggtggtgaaaggtcatttgtgcaatttattcttgaacct
ttgtataaaatttacagccaagttatcggagagcataaacgaagcgttgagtcgaccctt
gcggaattaggcgttactcttagcaatgtggcttataaattaaatgttcaacctttactc
agattggcctgcagctcagtctttggatctgccactggtttcaccgacatgctcgttcaa
cacataccttctgctaaagatgcagcagcgaagaaggtagagcacatatacacaggtcct
caagactcttatgtagcggaggcgatgaaagactgcgatccttcgggaattcttatggtc
aatgttacaaaactgtatccaaaatccgattgcagcgtcttcgatgctttcggacgagtt
tacagcgggtcgattcagactggtcagactgtacgcgtactcggtgaaggttattctcct
gatgacgaagaggacatgacgatcaaagaggtttcaaaactttgggtttaccaggctcgt
taccgtattcccgttagcaaagctcctgctggttcatgggttcttatcgagggcgtcgac
gcgtcaatcatgaagacggcaacgttgtgccctttagatatggatgatgatatttatata
tttcgcccgcttcggttcaacacgttgtcggttgtgaagacggcaacggaaccgttgaat
ccgagcgagctaccgaagatggtggagggcctgcggaaaattagcaagagttatcctctg
gcagtcactaaggttgaggagtcgggcgagcacaccattcttgggacaggggagatatat
ctcgactcgattatgaaggaccttagagaactttattcggaagtggaagttaaagtggca
gatccagtggtcactttctgtgaaactgttgttgaatcatcttcaatgaagtgttatgcc
gaaacacccaataagaagaacaaaataaccatgatatctgagccattggagaggggagtt
gccgaagatattgagaacggtgttgtgagcattgattggagtcaaaagaaaattggcgat
ttctttcaaaaaagatacgagtgggatctactttctgcaaggtcaatttgggcatttgga
ccagataaacaggggcctaacatcttattggatgatacccttccaagtgaagttgataaa
aatctactcaatgctgtgaaggattcaattgttcagggattccaatggggagcccgagaa
gggcctctttgtgatgaaccaattcgtaatgtgaagttcaaaattttggatgcatcaatt
gcttctgagcctctacatagaggtggcggccagattattccaaccgctagacgtgtagcc
tataccgcctttctcatggcaaccccaaggcttatggaacccgtttactatgtcgagatc
caaactccgattgattgtgtatctgcaatttacactgtattatctcgaagacggggccat
gtaactgccgatgtgccgaagcctggaactcctgcatatattgtgaaggctttcctaccg
gtcatagagtcatttggctttgaaacggatttgaggtaccatactcagggtcaagccttc
tgcctctctgtatttgatcactgggccatagtgcctggtgacccactcgacaaaaatatc
gtgctgcgcccgcttgaaccggcgcccattcagcatcttgctcgcgagttcatggtcaaa
acgagacgtaggaagggtatgagcgaggatgtgagcatcagcaaattctttgatgaatct
atgatgaatgagctggctctacaggatgcagagttacatctccagatgacataa
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