KEGG   Phalaenopsis equestris: 110033959
Entry
110033959         CDS       T05601                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
peq  Phalaenopsis equestris
Pathway
peq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    110033959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:peq03400]
    110033959
Enzymes [BR:peq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110033959
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     110033959
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C BRCT PTCB-BRCT RNA_ligase DNA_ligase_IV
Other DBs
NCBI-GeneID: 110033959
NCBI-ProteinID: XP_020593800
LinkDB
Position
Unknown
AA seq 1257 aa
MTDSTVRFGLLCSMFEAMVRDRSAAKKRKRFRTFLDLVYTGRDFFSAIRLILPSLDRERG
TYGLKESALAAALVDALGISKDSEDALRLINWRKGGARTGANAGNFALVAADILQRRQGS
ASGGLTIREVNDALDQLSLKEGRGEKAGVLSGFIKKTNAVEMKWIIMIILKDLKMGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLALRISDATTAW
RKFHGKQIVAECKFDGDRIQIHRNGKEIHFFSRNFLDHTEYLQGMSDVILQNILVDRCIL
DGEMLVWDTSTNRFAEFGSNQEIAKAAMQGLQGDRQLCYVAFDILYAGDTSVIHQSLTER
HELLHKVVKPLRGRLEILVPNDGLNLRHPVGQPCWSIIVNCVEEVEKFFKETVENRDEGI
VLKDLSSKWEPGDRSGKWLKLKPDYIHAGADLDVLIIGGYFGSGRHGGEVAQFLVGLAER
SDSTSFPKRFLSFCRVGTGLTDEDLDVLITKLKPHLRKNEYPKRSPPFYEVTNNSKERPD
VWVESPDKSVILSITSDIRTIKSEVFAAPYSLRFPRIQRVRYDKQWHECLDVESFRDLVQ
SSNGTTQRRVNQGALQQLNGKPKRIARKGEKRSISVITPHSIQADVSAVKKTLIFANMMF
YFVNVPSSSSVDYFHRLVIENAGKFSMNLNDTVTHCIAAEKKGIKYQAAIRHGDIIHYSW
FLDCCNQKKLVHLQPKYFLFFADSSKKKYQEEIDAFSDYYYWDVDIEDIKQIFCNMIGSV
NSNSKMIEHYRKKYLPVRRMGLFHGCFIYLHEMPFRNTEFKVISELAMRRMKLEIAMHGG
NVCDDMEPATHLLVYSVVGSHDFDEIYESIPSTQRHLLHQRKFKTLLDLPHLILVFPLLL
SAFYRLLKHREQIFCNMIGSVNSNSKMIEHYRKKYLPVRRMGLFHGCFIYLHEMPFRNTE
FKVISELAMRRMKLEIAMHGGNVCDDMEPATHLLVYSVVGSHDFDEIYESIPSTQRHLLH
QRKLHVLVHNWLQDSLDRSVKLPENDYNMKPDSLEEYAFEKKDNPTFPAIKCEAEEQNSA
ASGKRKRGRRPAGQAGVVRPARRPTRRSRAKTGKHSAKLGSDESDSIDSMEVAPTAYVKE
RGETEQKWRKEEHEEQSVKTERNQEITDLPVEECNSLNLMDIGDKSGDKLEVMTDPIHAM
LLDMIPSLSQTQKRHGEVDPIRVADDEKAVQAREENQNPAKKKVSYKDVAGELLKDW
NT seq 3774 nt   +upstreamnt  +downstreamnt
atgacagactcgacggtgcgcttcggcttgctatgcagcatgttcgaggctatggtgcgg
gaccgatcggcggcgaagaagcggaagcgattccggacgtttttggatctggtctacacc
ggccgcgacttcttcagcgccatccgcctcattctcccttccctggatcgcgagcgcggt
acttacggcctcaaggaatccgcacttgccgccgcactcgtggatgcgctcggcatctcc
aaggactccgaggatgccctccgtctcatcaactggcgtaagggcggggcacgaaccgga
gcaaacgctggaaattttgcactcgttgctgctgatattttgcaacggaggcagggatcg
gcttccggcgggcttacgatcagagaggtgaacgacgcacttgatcaactttccttgaag
gagggaaggggggagaaagctggggttctgtcaggtttcattaagaaaacaaatgcagtg
gagatgaaatggattataatgatcatacttaaagatttgaagatgggaattagtgagaag
agtatttttcatgagtttcatccagacgctgaagacctcttcaatgtgacttgtgacctt
aagcttgtttgtgaaaagctgaaagataggagtcagcggcataaacgacaggatatagaa
gtggggaaagctgttaggcctcagttggctttgcggatcagtgacgctacaactgcatgg
aggaagtttcatggtaagcagattgtggcagaatgcaaatttgatggtgatcgcattcaa
attcatagaaatggaaaagaaatacacttcttctcacggaattttctcgaccacacagaa
tatttacagggaatgtctgatgttattttgcaaaacattttggttgataggtgcatacta
gatggtgagatgttggtttgggatacttccaccaatcgttttgctgagtttggttcaaac
caggagatagcgaaggcagcaatgcagggattgcaaggtgataggcagttatgctatgtt
gcttttgatatactatacgctggagacactagcgttattcaccagagtttgactgaacgg
catgagctgcttcataaggttgtaaaaccattaaggggtcgcttagaaattttggtgcct
aacgatggtcttaacttacgtcacccagttggtcaaccatgctggtctattattgtcaat
tgtgtagaagaggttgaaaagttttttaaagaaactgttgaaaacagagatgaggggatt
gtgctgaaagaccttagttcaaaatgggaacctggtgaccgaagtgggaaatggttgaag
ttaaagcctgattacatacatgctggtgctgatcttgatgttcttattataggtggttat
tttggctctgggcgtcacgggggagaggtggctcagtttttggttggtcttgcagagcgc
tctgattccacaagttttcccaaaaggttcctttccttctgtcgggtgggtactggtctt
acggatgaggatctcgacgttctcattaccaaattgaagccccacttaaggaagaatgaa
taccctaaaagatcgccgcctttttatgaagtaacgaataattcaaaagagagaccagat
gtttgggttgagagccctgataagtcagttattctctctattactagtgatatcagaaca
ataaaatccgaggtttttgctgcaccctacagtttgaggtttccacgcatacaacgtgtg
agatatgacaagcagtggcatgagtgcctcgatgttgaatcatttagggatttggtgcag
tcaagcaatggcactacacaacggagagtaaatcaaggagctttgcaacaacttaatgga
aagcccaaaaggatagcaaggaaaggagaaaaaagaagcatttctgtcatcacaccccac
tccatccaggctgatgtctctgctgtaaagaagacgttgatatttgcaaatatgatgttt
tatttcgtgaatgttccctcatcttcttcagtagattatttccacagactagtaattgag
aatgcaggaaaattttctatgaatcttaatgatacagtaactcattgcatcgcagctgag
aaaaaaggcattaaatatcaagcagccatacgtcatggggatatcatccattattcttgg
tttttggactgttgcaatcaaaagaaacttgtgcatttacaacccaagtactttttgttt
tttgctgattcttccaagaagaagtaccaagaggagattgatgcattctctgattattat
tactgggatgttgacattgaagatataaaacagatattttgcaatatgattggatctgta
aactccaactccaaaatgattgagcattacaggaagaaatatcttccagtgagaagaatg
ggtctgtttcatggttgtttcatttacttacatgaaatgccttttaggaataccgagttc
aaagtaatatcagagctggccatgagaaggatgaaacttgaaattgcaatgcatgggggc
aatgtttgtgacgatatggaacctgcgacacatttattagtctattcagtggttggatca
catgactttgatgagatatatgaaagcattccatcaactcagcgccatcttttacaccag
agaaagtttaaaacgcttctggatctgccccacctcatacttgtttttcctctgctccta
agtgcattttacagactattgaaacaccgagaacagatattttgcaatatgattggatct
gtaaactccaactccaaaatgattgagcattacaggaagaaatatcttccagtgagaaga
atgggtctgtttcatggttgtttcatttacttacatgaaatgccttttaggaataccgag
ttcaaagtaatatcagagctggccatgagaaggatgaaacttgaaattgcaatgcatggg
ggcaatgtttgtgacgatatggaacctgcgacacatttattagtctattcagtggttgga
tcacatgactttgatgagatatatgaaagcattccatcaactcagcgccatcttttacac
cagagaaagttacatgtactggtgcataattggttgcaagattccttggatagaagtgta
aagttgcccgaaaatgattataatatgaagccagattctttggaagaatacgcattcgaa
aaaaaagacaatccgacatttccagcaatcaaatgtgaagctgaagaacagaactctgcc
gcatctggaaagcgaaaaagaggaaggcgaccagcaggacaagctggtgttgttcgacca
gctcgcagacccactcgacgaagtcgtgcgaagactggaaaacattcagcaaagctgggt
tcagatgagtctgatagcattgactccatggaagtagctccaacagcatatgttaaagaa
agaggagaaactgaacaaaaatggagaaaagaagagcatgaagaacaatctgttaagact
gaaaggaatcaggaaattacagatttgcctgtagaagagtgtaattctttgaatttaatg
gatattggagataaatcaggggataaattggaggtgatgactgatccaattcatgcaatg
ctgttagacatgatacccagtcttagccaaactcagaaaaggcatggagaagttgatccc
atccgtgtggctgatgacgagaaggcggtgcaggcaagagaagagaatcaaaacccggcg
aagaagaaagtgagctacaaagatgttgcgggcgagcttctcaaagattggtaa

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