Populus euphratica (Euphrates poplar): 105110636
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Entry
105110636 CDS
T05872
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105110636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105110636
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105110636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
SMC_N
AAA_15
AAA
nSTAND3
AAA_23
AAA_28
AAA_24
NACHT
Zeta_toxin
AAA_5
AAA_30
AAA_25
AAA_22
SRP54
G-alpha
PduV-EutP
AAA_33
AAA_14
Motif
Other DBs
NCBI-GeneID:
105110636
NCBI-ProteinID:
XP_011004029
UniProt:
A0AAJ6T4D6
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MAEKASQSDGGGENEKENSISICGMQYAYPGQHPLFYEFNLNISPGSRCLLVGANGSGKT
TLLKIMAGKHMVGGRDVVRVINGSAFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDF
SAEHMIFGVEGTDPVRREKLIELLDIDLKWRMHKVSDGQRRRVQICMGLLHPFKVLLLDE
VTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELKRAKKLT
EIHELKNSATLLSVVESWLRSETKNEKKKPANPPAQNQKTSPFGSSPFMSSRHMAFYR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagcttctcaatcagatggaggaggagaaaatgagaaggaaaacagtatc
agtatatgcggaatgcaatacgcatacccaggacagcatccactcttctacgaattcaat
ctcaacatctctcctggatctcgttgccttctcgttggcgctaacggatctgggaagacc
actttgctgaaaataatggcagggaagcatatggtaggaggaagagatgtggtgcgagtg
ataaatggttcggcttttcatgatactcaattggtttgtagtggtgacttggcttattta
ggcggttcttggagtaaaactgttggatctgctggggagattccactgcagggagacttc
tctgcagaacatatgatatttggagtggaagggactgatcctgttagaagagaaaagtta
attgagctgcttgacattgatttgaaatggcgtatgcacaaggtgtctgatgggcagcgg
cgacgagtccagatttgcatgggtcttcttcatccatttaaggttcttttgctagatgaa
gttacagtcgatctggatgttgttgccaggatggatttgcttgagttcttcaaggaagaa
tgtgatcagagaggagctacaattgtatatgctactcatatttttgatgggttagagacg
tgggcaacacatctagcatacatacaagatggtgagctgaagagggctaagaaattaacc
gagattcatgagttgaaaaactcagccacgctgctttctgttgttgagtcttggctccgt
tctgaaaccaagaatgagaagaagaaacccgctaaccctcctgcccaaaatcaaaagacc
tctccttttggtagttctcctttcatgtcttctagacacatggcattctaccgctga
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