Populus euphratica (Euphrates poplar): 105121114
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Entry
105121114 CDS
T05872
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105121114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105121114
Spliceosome [BR:
peu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105121114
Complex C
U5 SnRNP specific factors
105121114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Ras
TsaE
Septin
Motif
Other DBs
NCBI-GeneID:
105121114
NCBI-ProteinID:
XP_011017938
UniProt:
A0AAJ6TV58
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MDDNLYDEFGNYIGPEIESDRESDGEEEDEELPDKPHEDEEESDGEEAVHASNGWLTAPN
DVDMDNQVVLAEDKKYYPTAEEVYGPGVETLVNDEDEQPLEQPIIKPVRNIKFEVGVKDS
STYVSSQFVVGLMSNPSLVRNVALVGHLQHGKTVFMDMLVEQTHHTPTFDINSEKHIRYT
DTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLV
VDAAEGVMVNTERAIRHAIQEQLPIVVVINKVDRLITELKLPPKDAYHKLRHTIEVINNH
ISAVSSTAGNVQVIDPAAGNVCFAGATAGWSFTLHSFARLYLKLHGIPFDADKFASRLWG
DMYYNPEDRTFKKKPPASGAERSFVQFVLEPLYKIYSQVIGEHKKSVEATLAEFGVTLPN
SAYKLNVRPLLRLACSQVFGSASGFTDMLVKHIPSAKAAAARKVDHTYTGPKDSMIYQAM
LECDPDGPSMVNVTKLYPKSDCSSFDAFGRVYSGKIMTGQSVKVLGEGYSPEDEEDMTVK
EVTKLWVYQARYRLPISMAPPGSWVLIEGVDASIMKTATLCNVNYNEEDVYIFRPLQFNT
LPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDL
RELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGV
VSIDWNRKALGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKGLLGAVKD
SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMAT
PRLMEPVYYVEIQTPIDCLTAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFE
TDLRYHTQGQAFSLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMS
EDVSINKFFDEAMVVELAQQAADIHQQMM
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaatttgtatgatgagtttgggaactacattggtccggaaatagagtcagac
cgagagagcgatggtgaggaagaagatgaagaacttccagacaagcctcatgaagatgag
gaggaatctgatggtgaagaggcagttcatgcttccaatggttggcttactgcccctaat
gatgttgatatggataaccaagttgtccttgctgaggacaagaagtactacccaaccgcg
gaggaggtttatggtccaggtgttgaaacgttggttaacgatgaagatgagcagcctctt
gagcaaccgataattaagcctgttaggaacatcaagtttgaggttggggttaaggattcc
tcaacttatgtttccagccagtttgttgttggtcttatgtcaaatccctctttggtacgc
aacgttgccctcgtgggccatctacaacatgggaagacagtttttatggacatgttggtt
gagcaaacacatcatacaccaacttttgatataaatagcgagaagcatattaggtacaca
gatacaaggattgatgagcaagaaagaaggatatctatcaaggcagttccaatgtcactt
gtccttgaggatagcaattcaaagtcgtacctctgtaacatcatggacacccctggtcat
gtgaacttctctgatgaaatgactgctgccctcaggcttgctgatggtgcagtgttggtt
gtggatgctgctgaaggagtgatggtaaacacagagagggccatacgccacgcaattcag
gaacagctgcctattgttgttgtgatcaataaggttgacaggctcataacagagctcaaa
ttgcccccaaaggatgcttatcacaagctaaggcataccatagaagtcattaacaaccat
atatctgctgtctcttcaactgctggaaatgttcaagtgatagatccagctgctggaaat
gtttgttttgctggtgcaaccgcaggatggtccttcactttgcattcctttgccagattg
tatctcaaactccatggtatcccatttgatgctgataagtttgcatctcgtctctggggg
gatatgtactataatcctgaggacaggactttcaagaagaaacctcctgctagtggagca
gaaagatcgtttgtccaatttgtgctggaacctctctacaaaatatacagccaagtgatt
ggagaacataaaaaaagcgttgaggctactcttgctgagtttggtgttactcttcctaat
tcagcttataaattaaatgtcaggcctttgctaagactggcttgcagtcaagtttttggc
tcagcctcaggtttcactgacatgcttgttaagcatataccttcggctaaggctgctgct
gccaggaaggttgatcatacatatactgggcccaaagattcaatgatctaccaggccatg
ctagaatgtgatcctgatggcccctcaatggttaatgtgacgaaattgtatccgaagtca
gattgcagttcatttgatgcttttggtagggtttatagtggtaaaattatgacagggcag
tctgtaaaagttttgggagaaggctattcaccagaggacgaggaggacatgacagtaaaa
gaagtgacaaaactatgggtatatcaagctcggtataggttacccataagtatggctcct
cctggttcatgggttctcattgaaggtgtggatgcttcaattatgaaaactgcaactctc
tgtaatgtgaattataatgaagaagatgtatacatatttcgacctcttcagttcaatact
cttccagtagtgaaaactgctaccgaacctctaaatccaagtgagttgcccaaaatggtg
gagggtcttaggaagatcagtaaaagctatcctctggccataactaaagttgaggagtct
ggggagcacactatacttggtaccggagagttgtacttagattctattatgaaggacctt
agggagctatattctgaagtggaagtcaaggtagctgatcccgttgtctcattctgtgaa
actgtggtggagtcctcatcaatgaaatgctttgctgaaacacccaacaagaagaataaa
ataaccatgattgctgagccattggagaaagggctcgcagaagatattgaaaatggtgtt
gtaagcattgactggaatcggaaagctctaggtgacttcttcaagacaaaatatgattgg
gatttgcttgcagcacgatccatatgggcttttggccctgataagcagggacctaatatt
ttgctagatgacacacttccaactgaagtggacaagggattactaggtgccgtgaaggat
tctattgttcaagggtttcagtggggtgcacgagaaggaccactttgtgatgaaccaatc
agaaatgttaagttcaagatagttgatgctaggattgcgcctgaaccacttcatcgtgga
tctggtcaaataattccaacagctcggcgtgtggcctactcagctttccttatggcaacc
ccaaggctcatggaacccgtatattatgtggagatacaaacaccaattgactgtctcact
gcaatctatacggtgttatctcgcagacgtgggcatgttacagcagatgttcctcagcct
gggactccagcttatattgttaaggcatttttacctgtcatagaatcatttggttttgaa
acggacttgaggtaccatacccaaggtcaagcatttagcctctcggtgtttgatcattgg
gctatagtccctggagatccccttgataagagcattgttctgaggccacttgagcctgcc
ccaatccagcaccttgcccgtgaatttatggtgaagacaaggcgtcgcaagggaatgagt
gaagatgtgagcattaacaagttcttcgatgaggctatggtggttgagctggctcagcaa
gcagctgatattcatcaacaaatgatgtga
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