Populus euphratica (Euphrates poplar): 105122454
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Entry
105122454 CDS
T05872
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105122454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105122454
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105122454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
AAA_23
Arf
AAA_30
AAA
SMC_N
ORC-CDC6-like
nSTAND3
Zeta_toxin
AAA_7
TsaE
AAA_28
Motif
Other DBs
NCBI-GeneID:
105122454
NCBI-ProteinID:
XP_011019859
UniProt:
A0AAJ6XIF7
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MGVMEHQEPIIDINGLRFTYPGIDGHPPPGSKPLIDEFSLTLNSGDRCLLVGSNGAGKTT
ILKILGGKHMVEPQMVRVLGRSAFHDTALTSSGHLSYLGGEWRREVAFAGFEVPIQMDIS
AEKMIFGVAGIDPQRRAELIKVLDVDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEI
TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEEWPTHILYVAHGKLQFAMPMAK
IKEISNLSLMRTVESWLRKERDDERKRRQERKAGGLPEYENQVEGSRVTGDPARVAARVM
NNGWAAGRLHSTIAGEENFILSSNRVLR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttatggagcatcaagaaccgataatagatatcaacggcctgagattcacgtac
ccaggaatcgacggtcatccaccacctgggtctaaaccgttgatcgatgagttctctctc
accctcaattcgggtgatcgatgccttcttgttggatccaacggcgctgggaaaactaca
attctgaagatattaggaggaaaacacatggtggaaccccaaatggttcgtgtcttagga
aggtctgcttttcacgacactgctttaacttcttctggtcatctttcttatcttggagga
gagtggaggcgagaagttgcttttgctggttttgaggttccgatacaaatggatatttct
gcggagaagatgatatttggggtggcaggcattgatcctcaaagaagagctgagctaatc
aaggtattggacgttgatctgtcatggaggatgcacaaggtttctgatggccagagaagg
cgagtgcaaatttgcatgggtctcttgaggccattcaaggttcttcttcttgatgagata
acggttgacctcgatgtgctagcaagggctgaccttctgaagtttctaagaaaggaatgt
gaagagcgaggcgctacaattatctatgcaacacatatatttgatggtttggaggagtgg
ccaacgcatattttgtatgttgctcatgggaagttgcaattcgcaatgccaatggccaaa
ataaaagagattagtaatttgtcactaatgagaacagtggagagctggctgaggaaggaa
agagatgatgagaggaagagaagacaagagagaaaggcaggaggtcttccagaatatgaa
aaccaggtcgagggaagtagagtgactggtgatccagctcgtgttgctgctcgtgttatg
aacaatggttgggctgcaggaaggctgcactccactattgcgggtgaagagaacttcatc
ttgagctcaaacagagttttgaggtag
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