Entry |
|
Name |
(RefSeq) 5'-3' exoribonuclease 4
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KO |
K20553 | 5'-3' exoribonuclease 4 [EC:3.1.13.-] |
|
Organism |
peu Populus euphratica (Euphrates poplar)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:peu00001]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
105131272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:peu03019]
105131272
Messenger RNA biogenesis [BR:peu03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
105131272
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
948 aa
MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII
HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF
RAAKDAAQAEAEEERLRKEFEAKGGLLSVKEKPQTCDSNVITPGTQFMAVLSIALQYYIQ
SRLNHNPGWQNTKVILSDSNVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREMVIFPGQQEKCFLCGQAGHLAAECRGKQGDDALDWNVVDDTPIHKK
KYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREGA
INLLMHIYRKEFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENNEE
MKLKARREFSEEIQAPPVDTVKLGEPGYKERYYAEKFDLSNEEEIEKVRKDVVLKYVEGL
CWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLGEPFRPFDQLMGTLPAASS
NALPEEYRKLMTDPSSPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLER
TLMEEEQVRNSVMLDLLYVHPVHPLSQQVISYYHHNYRLPVSERIPLEIDTRASGGMNGY
LWLSERNVWRSVVPSPINGLPALEYNQVLNVTYLTPSSHRHIPEPPEGVVMPEKILKPTD
IKLFPTLWHEDNGRRQQGRERPQVPRAVAGPLLGEAAHRLVKNTLNIKPNGSSSRGNYTF
NRPRPAGPAVYGRGYGDDPNYHYAHYNNHQGLMSNHMYPVSSNGLQGNRHISRPQDRVQY
HQQYHDLSTGVSALTVEENFRSRAPAVISPRIPNPGYTLNLYNQFEHNTGPLPSPPTNWI
NKTAAGDAGIYFRQDTTSRGPNEKQLKQVYQVKTQVAQETSDILAEEI |
NT seq |
2847 nt +upstreamnt +downstreamnt
atgggtgtgccggcgttctacaggtggcttgcagaccggtacccgctatcaattgttgat
gtaattgaagaggaacctcaagaagattcgaatggaaactctaaaccaatcgatgtttca
aaacctaaccctaatggcatcgagtacgataatttgtatttggatatgaacgggattatc
catccctgcttccatcctgaaggaaagcctgcacctgctacttatgatgatgtgttcaag
tctatatttgtttacattgatcatttatttgctttggttcgtccaaggaagctacttttt
atggcaattgatggggtcgctccaagagctaaaatgaatcagcaacggtcacgacggttt
agagctgcgaaagatgctgctcaagcagaagctgaagaagaaaggctgaggaaagagttt
gaggctaaggggggacttttatctgttaaagaaaagcctcaaacatgtgattctaatgtt
ataacacctggcactcaatttatggcagttctttcaattgcacttcagtattatatacaa
agtagattgaatcacaatccaggctggcagaataccaaggttattctttctgattcaaat
gttcctggtgagggagagcacaaaatcatgtcttatataagattgcaacgcaacattccc
ggtttcaatccaaacacacgccactgtctgtatggtctggatgcggatttgattatgctg
tctttagctacgcatgaggttcacttttcaatattaagagagatggtcatatttccaggg
caacaggagaaatgttttctctgtggtcaggctggtcatcttgcagctgaatgtcgtggt
aagcaaggagatgatgctttagattggaatgtggtagatgataccccaattcacaagaag
aaatatcagtttctcaacatctgggttttgcgagaatatctgcaatatgatctggacatt
ccaaacccaccatttgcaattgacttcgaaaagatagtggatgactttgtgtttatgtgt
ttttttgttggcaatgattttcttccgcatatgccaacattggaaattcgggagggtgct
ataaacttactgatgcatatttatagaaaggagttctctgcaatgggtggttatcttact
cttgcgggtgaggttttccttgataaagtagaacactttattcaatctgttgctgtttac
gaggagcaaatctttcagaagagggctcgtatacaacaggcttttgagaataatgaagaa
atgaaactcaaagcaagaagagagttctctgaagagatacaagcgccacctgtagatacg
gttaaattaggggagcctggatacaaagagagatattatgctgagaaatttgatttatca
aatgaagaggagattgagaaagttagaaaagatgtggttttgaagtatgtggaaggtctg
tgttgggtctgtcgctattactaccagggtgtttgctcttggcaatggttttatccatac
cattatgcaccatttgcttcagatattaaggatctggatgagatggaaataacctttttt
cttggagagccattcagaccctttgatcaacttatgggcaccctaccagctgcgagttct
aatgctttgccagaagaatacaggaaattgatgactgacccatcttccccaattcatcaa
ttcttcccctcagattttgaaattgacatgaatggcaagcgctttgcctggcagggtatt
gccaaattgcccttcatcgatgagaggaaattgcttgcccaaacaaagaagcttgaaaga
actttaatggaggaagagcaggtcaggaatagtgtgatgcttgatttgctatatgtccat
cctgttcatccattgtctcaacaagtcatttcttactatcatcataactatcgtttacct
gttagcgaaagaattcctttggaaattgacacgagagctagtggtggaatgaatggttat
ctttggttatctgaaagaaatgtgtggagaagtgtggtcccttctcctatcaatggattg
ccagccttagagtataaccaagttttaaatgtcacatacctaactccttcaagtcataga
cacatcccagaacctccagagggtgtagtcatgcctgaaaagatcttaaaacctacagat
attaaactgtttcccacattatggcatgaagataatggccgcagacagcaaggcagggaa
aggccacaagtaccccgagcagtagctggccctttattgggggaagcagctcatcgcctt
gtcaagaacacccttaatatcaaaccaaacggttcatcttctcgaggcaattacacattc
aacaggccaagacctgctgggccagctgtttatggaaggggctatggggacgatccaaat
tatcattatgcacattacaataaccatcaaggcctaatgagtaatcatatgtatcctgtc
tcatcaaatggtttgcaaggcaaccgacacatctctaggcctcaagacagagtgcagtac
catcaacaataccatgatttgagtactggggtgtctgctctgactgtagaagaaaatttc
agaagcagggcacctgcagtgatctcacctcgaattccgaatccaggatacacactgaat
ttatacaatcagtttgagcataacacaggtccacttccatcaccacccaccaattggatc
aacaaaacagcagcaggagacgctgggatctacttcagacaagacacaacatcacggggt
ccaaatgagaagcagttgaagcaggtttaccaggttaaaacacaagtagctcaggagacg
tcagatattctagctgaagaaatataa |