Pedobacter sp. D749: KYH19_18260
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Entry
KYH19_18260 CDS
T10701
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pev Pedobacter sp. D749
Pathway
pev00270
Cysteine and methionine metabolism
pev00450
Selenocompound metabolism
pev00670
One carbon pool by folate
pev01100
Metabolic pathways
pev01110
Biosynthesis of secondary metabolites
pev01230
Biosynthesis of amino acids
pev04980
Cobalamin transport and metabolism
pev04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pev00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KYH19_18260 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
KYH19_18260 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KYH19_18260 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KYH19_18260 (metH)
04980 Cobalamin transport and metabolism
KYH19_18260 (metH)
Enzymes [BR:
pev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
KYH19_18260 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
ComA
Motif
Other DBs
NCBI-ProteinID:
QXU40927
LinkDB
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Position
complement(4496130..4499837)
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AA seq
1235 aa
AA seq
DB search
MGIREELEKRILVIDGAMGTMIQRYTLTEEDFRGERFKNHPCDVKGNNDLLNITRPDIIK
TIHLEYLAAGADIIETNTFSTQRISMADYQMEDLSYEMSFEGARVAKEAVNEFMAANPDR
KCFVAGAIGPTNRTLSMSPNVNDPGFRAVYFDELEAAYYEQVRGLVDGGSDVLLIETIFD
TLNAKVAIVAIKKYEEVIGRKLEIMISGTITDASGRTLSGQTAEAFLNSVMHAKPLSIGF
NCALGAKEMRPHIEELAAKAGCYVSAYPNAGLPNEFGAYDEQPHETAHLVDDFIASGFVN
IVGGCCGTTPDHIGCIAKNARKAEPRKIPVLEPYMRLSGLEPVTITPDSIFVNIGERTNI
TGSPKFSKLILGGDYEAALAVALQQVEGGAQVIDVNMDEGMLDSEAAMTKFLNLIASEPD
IAKLPIMVDSSKWSVIENGLKCLQGKGIVNSISLKEGEDKFRESARKIMQYGAAVVVMAF
DEQGQADNYERRKEICKRSYDILVHEIGFPPEDIIFDPNILTVATGLEEHNNYAVDFINA
TRWIKENLPHAKVSGGVSNISFSFRGNNTVREAMHSAFLYHAIQAGLDMGIVNAGMLEVY
QEIPPELLERVEDVLLNRRDDATERLVEYADTVKSKGKEVVKDEEWRKGPVEERLSHSLV
KGIVEYLDDDVEEARQKYARPIQVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKKA
VAYLLPFIEQEKLDNPDQDQSSSAGRVLMATVKGDVHDIGKNIVGVVLACNNFEIVDMGV
MVPAQEIIKKAKEIKADIIGLSGLITPSLDEMVHFAKEMEREGFTIPLIIGGATTSRIHA
AVKVAPNYSGPAIHVLDASRSVTVCSTLMNPDTRDEYIAGIRAEYDKAREAHLNKRSDKR
FKTLEEARANKFKIDFQLNLPVPEFTGTRVFDNYPLEELVPYIDWTPFFHTWELRGSYPK
IFDDKNVGDEAKKLFDDAQTLLKRILDEKLLTARAVIGFWPANAVGDDIVLDVRGKMENG
SEAPSSSLHQPSSVTIHTLRQQAEKVDGQPYYALSDFIAPKESGIQDYFGGFAVTAGIGI
DELVNEFESNYDDYNSIMAKALADRLAEAFAERMHERVRKEYWGYAQDENLSNQELIKEE
YAGIRPAPGYPACPEHTEKGTLFQLLDAENKIGLHLTESYAMYPTAAVSGFYFAHPDSRY
FGLGKITKDQIEDYAIRKNMPIEEVERWLSPNLAY
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggtataagagaagaattagaaaaacgtattttggtgattgatggtgcaatgggtacc
atgattcagcgatataccttaaccgaagaagattttagaggggaacgatttaaaaaccat
ccctgtgatgtaaaaggcaataatgatttgcttaacatcacacgtccggatattattaaa
acaatacacctggagtacctggccgctggtgccgatattattgagacaaatactttcagt
acgcagcgcatttccatggccgattaccagatggaagacctttcttacgaaatgagtttt
gaaggtgcacgcgtggcaaaagaagctgttaacgagttcatggctgcaaatccagaccgt
aaatgttttgttgccggtgctattggcccaaccaaccgtaccctgtccatgtcgccgaat
gtaaacgaccctggttttagggcggtttattttgatgagctcgaagcagcttattacgaa
caggtacgtggtttagtagatggcggttccgatgtattattaatcgaaaccattttcgat
accttgaatgctaaagtggctattgtagccattaaaaaatatgaagaggtaattgggcgt
aaactggagatcatgatttctggtaccattaccgatgcttcgggtagaacactttcaggg
caaactgctgaggcttttttgaactctgtaatgcatgcaaaaccattaagtatcggtttt
aactgtgctttgggggctaaagaaatgcgtccgcacattgaagagttagcggcaaaagca
ggatgttatgtttccgcctatccaaatgcgggtttgccaaatgagtttggtgcttacgat
gagcagccgcatgaaaccgcacatctggttgatgactttattgcttccggttttgtgaat
atagtaggaggttgttgtggtaccacgccagatcatattggctgtattgctaaaaatgcc
cgaaaagctgagccccgtaaaataccggttcttgaaccatacatgcgtttaagcggattg
gagcctgtaaccatcaccccggatagtatttttgtaaatattggtgaaagaaccaatatt
accggatctccaaaattctccaaactgattttgggtggcgattatgaagccgcattagcc
gttgctttgcagcaagttgaaggcggtgcacaggtaatcgatgtaaacatggatgaaggg
atgctggattcggaagcagcaatgactaaattcttaaacctcatcgcttctgaaccggac
attgccaaattgcctatcatggtcgattcatctaaatggtcggttattgaaaatggctta
aaatgtttgcagggaaaaggaattgtaaactcgatttccttaaaagaaggggaagataaa
ttccgcgaaagtgcccgcaaaattatgcaatatggtgctgccgtagttgtaatggctttt
gatgaacagggacaggccgataattatgagcgtagaaaagaaatatgcaaaaggagttat
gatattttggtacacgaaattggtttcccgccagaggatattattttcgacccaaatatt
ttaaccgttgcaaccggattagaagagcataataattatgccgtcgattttattaatgcc
acccgttggatcaaagaaaacctgcctcacgctaaagtaagtggtggggtttccaatatt
tctttctctttcagagggaataataccgttcgcgaggcgatgcactccgcatttctttat
catgccattcaggccggtttagatatggggatcgtaaacgcgggaatgttagaggtttat
caggaaattccgcccgaattattagaaagagtagaagatgtgcttttaaaccgaagagac
gatgctacggagcgtttggtagaatatgccgataccgtaaaatcaaaaggcaaagaggtt
gttaaagatgaagagtggagaaaaggtcctgttgaagaaaggttatcacattcactggta
aaaggaattgtggaatacctggatgatgatgtggaagaagccagacaaaaatatgcccgg
ccgattcaggtaattgaaggaccattgatggacggaatgaatattgtcggtgatcttttt
ggtgccggaaaaatgttcctgcctcaggtggtaaaatcggcgagggtaatgaaaaaagcg
gtagcctatttattgccgtttatcgaacaggaaaaactggataatcccgatcaggatcag
agttcatctgccggaagagtgttaatggccaccgtaaaaggcgatgtacacgatattgga
aaaaatattgtgggcgtggtattggcttgtaataacttcgaaattgttgatatgggcgtg
atggttccggcacaggaaatcatcaaaaaagctaaagaaataaaagctgatattattggt
ctaagcggtttaattacaccgtcactggatgaaatggttcactttgccaaagagatggaa
cgcgaaggttttaccattcccttgatcatcggtggagctactacttccaggatccacgct
gcggtaaaagtagcacctaattattcaggtcccgccatccatgtgttggatgcttccaga
agtgttaccgtttgtagtactttaatgaatcctgatacgagagatgaatatattgctgga
ataagagctgaatatgataaagcccgcgaagcacatttaaataaacgatcggataaacgt
tttaaaactttagaagaagcacgagcgaataaatttaagatcgattttcaactcaatcta
cctgttccggaatttacaggtacaagggtttttgataattatcccttagaagaactggtt
ccttacatcgattggacaccatttttccatacctgggaactccgcggaagttatccgaaa
attttcgatgataaaaatgttggtgatgaagcaaagaaactttttgatgatgcacagact
ttattaaaacgcattctggacgaaaaactattaacggcaagagctgtaattggtttctgg
cctgcaaatgcggtaggagacgatattgttttggatgtaagaggtaaaatggaaaatgga
agtgaagccccatcatctagcttacatcaaccatcttccgttacgattcacactcttcgc
cagcaggccgaaaaggtagatgggcagccttattatgctttatctgatttcattgctccg
aaagaaagtggtattcaggattattttggtggttttgctgtaactgctggtatcgggatt
gatgaactggtaaatgagttcgaatccaattacgatgattataacagtatcatggctaaa
gcattggccgatcgtttagctgaagcatttgctgagcggatgcacgaacgtgtacgtaaa
gagtattggggctatgcacaggatgaaaatctaagcaatcaggaattaattaaggaagaa
tacgcagggattcgtccggcgccaggttatcctgcctgccctgagcataccgaaaaaggc
actttgttccaattgcttgatgcagagaataaaatcggattgcatttaacagaaagttat
gccatgtatccaacagctgcggtaagtgggttttatttcgcacatccggattcgaggtat
tttggattgggaaaaattaccaaagatcagattgaagattacgccatcagaaagaatatg
ccaattgaagaagtggagcggtggttaagtccgaatttagcttattaa
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