Pedobacter endophyticus: IZT61_10470
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Entry
IZT61_10470 CDS
T07452
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00270
Cysteine and methionine metabolism
pex00450
Selenocompound metabolism
pex00670
One carbon pool by folate
pex01100
Metabolic pathways
pex01110
Biosynthesis of secondary metabolites
pex01230
Biosynthesis of amino acids
pex04980
Cobalamin transport and metabolism
pex04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IZT61_10470 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IZT61_10470 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IZT61_10470 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IZT61_10470 (metH)
04980 Cobalamin transport and metabolism
IZT61_10470 (metH)
Enzymes [BR:
pex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
IZT61_10470 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QPH41641
UniProt:
A0A7S9L370
LinkDB
All DBs
Position
complement(2607454..2611152)
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AA seq
1232 aa
AA seq
DB search
MSIREELEKRILVIDGAMGTMIQRYTLTEEDFRGERFKNHPCDVKGNNDLLNITRPDIIK
AIHLEYLAAGADIIETNTFSTQRISMADYQMEDLSYELSYEGARVAKEAATEFMAANPDR
KCFVAGAIGPTNRTLSMSPNVNDPGFRAVYFDELEAAYYEQVRGLVDGGSDVLLIETIFD
TLNAKVAIVAIKKYEEVIGRKLEIMISGTITDASGRTLSGQTAEAFLNSVMHAKPLSIGF
NCALGAKEMRPHIEELAAKAGCYVSAYPNAGLPNEFGAYDEQPHETAHLVDDFIASGFVN
IVGGCCGTTPEHIGCIANNAKKAAPRKLPTIEPYMRLSGLEPVTIKPDSIFVNVGERTNI
TGSPKFSKLILSGDYEAALAVALQQVEGGAQIIDVNMDEGMLDSEAAMTKFLNLIASEPD
IAKLPIMVDSSKWSVIENGLKCLQGKGIVNSISLKEGEEKFRESARKIMQYGAAVVVMAF
DEQGQADNYQRRIEICKRSYDILVNEIGFPPEDIIFDPNILTVATGLEEHNNYAVDFINA
TRWIKENLPHAKVSGGVSNISFSFRGNNVVREAMHSAFLYHAIRAGLDMGIVNAGMLEVY
QEIPPELLERVEDVLLNRRDDATERLVEYAETVKSKGKEIVKDEQWRKGTVEERLSHSLV
KGLVEYLDDDVEEARQKYARPIQVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKKA
VAYLLPFIEQEKLDNPDQDQNSSAGKVLMATVKGDVHDIGKNIVGVVLACNNFEIVDMGV
MVPAQDIIKKAKEINADIIGLSGLITPSLDEMVHFAKEMEREGFTIPLIIGGATTSRIHA
AVKVAPNYSGPAIHVLDASRSVTVCSTLMNPETKGDYVAGIKAEYEKAREAHLNKRSDKR
FKTIDEARENKFKIDFDRNLPVPEFTGTRVFDNYPLEELVPYIDWTPFFHTWELRGSYPK
IFDDKNVGDEAKKLFDDAQTLLKRILDEKLLTARGVIGFWPANSVGDDIELRVGSVELGD
SKLQAPSPKLTTIHTLRQQAEKVDGQPYYALSDFIAPKESGIQDYFGGFAVTTGIGIDEL
VAEFEANHDDYNSIMAKALADRLAEAFAERMHERVRKEFWGYAKNENLNNQELIKEEYAG
IRPAPGYPACPEHTEKGTLFELLDAENQIGLRLTESYAMYPTAAVSGFYFAHPDSRYFGL
GKITKDQVEDYAVRKNMSIDEVERWLSPNLAY
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagagaagaattagaaaagcgtattttagtaattgatggtgcaatgggcact
atgattcaacgctatactttaacagaagaagattttaggggcgaaaggtttaaaaatcat
ccatgcgatgtgaagggcaataatgatttgctcaacattacacgtcctgatattatcaag
gcgatacatcttgaatatttagcggcaggtgctgatattatcgaaaccaataccttcagt
acgcaaagaatttcgatggctgattaccaaatggaagatctttcttacgaactcagctac
gaaggcgctcgtgttgccaaagaggcggctacggaatttatggcggccaatccggataga
aaatgctttgtagcaggtgcgataggcccaaccaaccgcacgctgtccatgtcgccaaat
gtaaacgatcccggttttagggcggtttatttcgacgagcttgaggccgcttattacgag
caggttcgcggcctggtagatgggggttccgatgtgctgttaatcgaaacaattttcgat
acgctgaatgccaaagtggccattgttgccataaaaaaatatgaagaggtaatcggaaga
aaacttgagatcatgatttcaggaaccattaccgatgcgtctggtagaaccttgtctggc
caaactgcagaggcttttttaaactctgtaatgcacgctaaacccttaagtattggtttt
aactgtgccttgggtgcaaaagaaatgcgcccacatattgaagaactggctgcaaaagcg
ggctgttatgtatcggcctatccaaatgcaggcttaccaaacgagttcggtgcctacgat
gaacaaccgcatgaaaccgctcatctggttgatgattttatcgcttccggatttgtgaat
attgtcggcggctgctgcggtaccaccccagagcatattggttgtatcgccaataacgcc
aaaaaagcggcgccaagaaagttgccaactatagagccatacatgaggttgagcggcctt
gagcccgtaaccattaagcccgacagcatttttgtgaacgttggagagcgaacgaacatc
accggatcgcccaagttttctaagcttattttaagcggcgattatgaagcggcacttgcc
gtggccttacaacaagtagagggaggcgcacagattatcgatgtgaacatggatgagggg
atgctcgattcggaagccgctatgactaagtttttaaacttaattgcttccgagccggat
attgccaagctacccatcatggtcgactcctctaagtggtcggtgattgaaaacggctta
aaatgtttgcagggaaaagggatcgtaaactctatttcgttaaaagaaggcgaagaaaag
ttccgtgagagtgcccgcaaaattatgcaatacggcgcagcagttgtggtaatggcgttt
gatgagcaagggcaggcagacaactatcaacgaaggatagaaatctgtaaacgcagctac
gatattttagtaaatgaaattggtttcccgccagaagacattatattcgatccgaacatc
ttaaccgttgccaccggactggaggagcataataactatgctgtcgactttattaacgcc
acccgttggattaaagaaaacctgcctcacgcgaaagtgagtggtggcgtttccaacata
tcattctcttttaggggaaataatgtggttcgcgaagcgatgcactccgcatttctttac
catgctatccgggcaggtttagatatgggcattgtaaatgccggaatgttagaggtttat
caggaaattccgcccgagcttttggagcgggttgaagatgtactgctgaatcgcagagat
gatgcaaccgaacgtttggttgaatatgccgaaacggtaaaatccaaaggaaaagaaatt
gttaaagatgaacaatggcgaaaaggcaccgttgaagaaagattatcccattcgctggta
aagggtttggtggagtatttagacgacgatgtggaagaagcacgccagaaatatgcccgg
cctattcaggtaattgaaggcccattgatggatggtatgaacatcgttggcgatttattt
ggcgctggcaaaatgttcctgccccaagtggtaaaatcggcccgtgtaatgaaaaaggcc
gtggcttacctgcttcctttcatcgaacaagaaaagttagacaaccccgatcaggatcaa
aattcatccgcagggaaagtgctgatggctacagtaaaaggtgatgttcatgatatcgga
aaaaatatcgtaggcgtagtgcttgcctgtaacaacttcgagattgtagatatgggcgtg
atggttcctgcgcaagatatcatcaaaaaagccaaagaaattaatgccgatattattggt
ttaagcggattaattacgccatcgctggatgaaatggttcattttgccaaggaaatggaa
cgcgaaggcttcaccataccgttaattattggcggcgcaaccacatcccgcattcatgcc
gccgtaaaagtggcgccaaattattcaggtcccgctatacacgttttggatgcatcgaga
agtgtaaccgtttgcagcaccttgatgaaccctgaaacgaaaggcgattatgttgccgga
attaaggccgagtacgaaaaagcacgagaggcgcatttaaacaaacggtctgataagcgt
tttaaaacgattgacgaagcccgcgaaaacaaatttaagatcgatttcgatcgaaacctt
cctgttccggaatttacaggaacacgggtttttgataactatcctttagaagaattggtg
ccttatatcgattggacaccgtttttccacacctgggaacttcgcggaagctaccctaaa
atattcgatgataagaacgttggcgatgaggctaaaaagcttttcgacgatgcacaaacc
ttgctgaaacggattttggatgaaaaattattgaccgccaggggcgttattggtttttgg
ccagcaaattcggttggagacgacattgagttgagagttgggagtgttgagttgggagat
tccaaactccaagctccaagccccaagctaacaactatccacaccctccgccagcaagca
gaaaaagtagatgggcaaccctattatgcgttatctgatttcattgcaccaaaagaaagc
ggaatacaggattatttcggtggttttgccgtaacaacgggcatcggaattgatgagttg
gtggctgaatttgaagcaaaccacgacgattataatagcatcatggcaaaagccttggcc
gatcggttggccgaagcatttgctgagcggatgcacgagcgggttcgtaaagaattttgg
ggttatgccaaaaatgaaaacctcaataatcaagaattaatcaaagaagaatacgcaggg
attcgtccggcgccaggttatccagcctgtcctgagcataccgaaaagggaaccttgttt
gaattgctcgatgcggagaaccaaattgggcttcgactgacagaaagctacgccatgtat
ccaacggctgcggtaagcggattttattttgcgcatccagattcaaggtactttggcctg
ggtaaaattacaaaagatcaggtagaggattatgcagtgcgaaagaacatgtcgatagac
gaagtagaaagatggcttagccccaatttggcctattaa
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