KEGG   Pedobacter endophyticus: IZT61_10470
Entry
IZT61_10470       CDS       T07452                                 
Symbol
metH
Name
(GenBank) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
pex  Pedobacter endophyticus
Pathway
pex00270  Cysteine and methionine metabolism
pex00450  Selenocompound metabolism
pex00670  One carbon pool by folate
pex01100  Metabolic pathways
pex01110  Biosynthesis of secondary metabolites
pex01230  Biosynthesis of amino acids
pex04980  Cobalamin transport and metabolism
pex04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pex00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    IZT61_10470 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    IZT61_10470 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    IZT61_10470 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    IZT61_10470 (metH)
   04980 Cobalamin transport and metabolism
    IZT61_10470 (metH)
Enzymes [BR:pex01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     IZT61_10470 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: QPH41641
UniProt: A0A7S9L370
LinkDB
Position
complement(2607454..2611152)
AA seq 1232 aa
MSIREELEKRILVIDGAMGTMIQRYTLTEEDFRGERFKNHPCDVKGNNDLLNITRPDIIK
AIHLEYLAAGADIIETNTFSTQRISMADYQMEDLSYELSYEGARVAKEAATEFMAANPDR
KCFVAGAIGPTNRTLSMSPNVNDPGFRAVYFDELEAAYYEQVRGLVDGGSDVLLIETIFD
TLNAKVAIVAIKKYEEVIGRKLEIMISGTITDASGRTLSGQTAEAFLNSVMHAKPLSIGF
NCALGAKEMRPHIEELAAKAGCYVSAYPNAGLPNEFGAYDEQPHETAHLVDDFIASGFVN
IVGGCCGTTPEHIGCIANNAKKAAPRKLPTIEPYMRLSGLEPVTIKPDSIFVNVGERTNI
TGSPKFSKLILSGDYEAALAVALQQVEGGAQIIDVNMDEGMLDSEAAMTKFLNLIASEPD
IAKLPIMVDSSKWSVIENGLKCLQGKGIVNSISLKEGEEKFRESARKIMQYGAAVVVMAF
DEQGQADNYQRRIEICKRSYDILVNEIGFPPEDIIFDPNILTVATGLEEHNNYAVDFINA
TRWIKENLPHAKVSGGVSNISFSFRGNNVVREAMHSAFLYHAIRAGLDMGIVNAGMLEVY
QEIPPELLERVEDVLLNRRDDATERLVEYAETVKSKGKEIVKDEQWRKGTVEERLSHSLV
KGLVEYLDDDVEEARQKYARPIQVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKKA
VAYLLPFIEQEKLDNPDQDQNSSAGKVLMATVKGDVHDIGKNIVGVVLACNNFEIVDMGV
MVPAQDIIKKAKEINADIIGLSGLITPSLDEMVHFAKEMEREGFTIPLIIGGATTSRIHA
AVKVAPNYSGPAIHVLDASRSVTVCSTLMNPETKGDYVAGIKAEYEKAREAHLNKRSDKR
FKTIDEARENKFKIDFDRNLPVPEFTGTRVFDNYPLEELVPYIDWTPFFHTWELRGSYPK
IFDDKNVGDEAKKLFDDAQTLLKRILDEKLLTARGVIGFWPANSVGDDIELRVGSVELGD
SKLQAPSPKLTTIHTLRQQAEKVDGQPYYALSDFIAPKESGIQDYFGGFAVTTGIGIDEL
VAEFEANHDDYNSIMAKALADRLAEAFAERMHERVRKEFWGYAKNENLNNQELIKEEYAG
IRPAPGYPACPEHTEKGTLFELLDAENQIGLRLTESYAMYPTAAVSGFYFAHPDSRYFGL
GKITKDQVEDYAVRKNMSIDEVERWLSPNLAY
NT seq 3699 nt   +upstreamnt  +downstreamnt
atgagtataagagaagaattagaaaagcgtattttagtaattgatggtgcaatgggcact
atgattcaacgctatactttaacagaagaagattttaggggcgaaaggtttaaaaatcat
ccatgcgatgtgaagggcaataatgatttgctcaacattacacgtcctgatattatcaag
gcgatacatcttgaatatttagcggcaggtgctgatattatcgaaaccaataccttcagt
acgcaaagaatttcgatggctgattaccaaatggaagatctttcttacgaactcagctac
gaaggcgctcgtgttgccaaagaggcggctacggaatttatggcggccaatccggataga
aaatgctttgtagcaggtgcgataggcccaaccaaccgcacgctgtccatgtcgccaaat
gtaaacgatcccggttttagggcggtttatttcgacgagcttgaggccgcttattacgag
caggttcgcggcctggtagatgggggttccgatgtgctgttaatcgaaacaattttcgat
acgctgaatgccaaagtggccattgttgccataaaaaaatatgaagaggtaatcggaaga
aaacttgagatcatgatttcaggaaccattaccgatgcgtctggtagaaccttgtctggc
caaactgcagaggcttttttaaactctgtaatgcacgctaaacccttaagtattggtttt
aactgtgccttgggtgcaaaagaaatgcgcccacatattgaagaactggctgcaaaagcg
ggctgttatgtatcggcctatccaaatgcaggcttaccaaacgagttcggtgcctacgat
gaacaaccgcatgaaaccgctcatctggttgatgattttatcgcttccggatttgtgaat
attgtcggcggctgctgcggtaccaccccagagcatattggttgtatcgccaataacgcc
aaaaaagcggcgccaagaaagttgccaactatagagccatacatgaggttgagcggcctt
gagcccgtaaccattaagcccgacagcatttttgtgaacgttggagagcgaacgaacatc
accggatcgcccaagttttctaagcttattttaagcggcgattatgaagcggcacttgcc
gtggccttacaacaagtagagggaggcgcacagattatcgatgtgaacatggatgagggg
atgctcgattcggaagccgctatgactaagtttttaaacttaattgcttccgagccggat
attgccaagctacccatcatggtcgactcctctaagtggtcggtgattgaaaacggctta
aaatgtttgcagggaaaagggatcgtaaactctatttcgttaaaagaaggcgaagaaaag
ttccgtgagagtgcccgcaaaattatgcaatacggcgcagcagttgtggtaatggcgttt
gatgagcaagggcaggcagacaactatcaacgaaggatagaaatctgtaaacgcagctac
gatattttagtaaatgaaattggtttcccgccagaagacattatattcgatccgaacatc
ttaaccgttgccaccggactggaggagcataataactatgctgtcgactttattaacgcc
acccgttggattaaagaaaacctgcctcacgcgaaagtgagtggtggcgtttccaacata
tcattctcttttaggggaaataatgtggttcgcgaagcgatgcactccgcatttctttac
catgctatccgggcaggtttagatatgggcattgtaaatgccggaatgttagaggtttat
caggaaattccgcccgagcttttggagcgggttgaagatgtactgctgaatcgcagagat
gatgcaaccgaacgtttggttgaatatgccgaaacggtaaaatccaaaggaaaagaaatt
gttaaagatgaacaatggcgaaaaggcaccgttgaagaaagattatcccattcgctggta
aagggtttggtggagtatttagacgacgatgtggaagaagcacgccagaaatatgcccgg
cctattcaggtaattgaaggcccattgatggatggtatgaacatcgttggcgatttattt
ggcgctggcaaaatgttcctgccccaagtggtaaaatcggcccgtgtaatgaaaaaggcc
gtggcttacctgcttcctttcatcgaacaagaaaagttagacaaccccgatcaggatcaa
aattcatccgcagggaaagtgctgatggctacagtaaaaggtgatgttcatgatatcgga
aaaaatatcgtaggcgtagtgcttgcctgtaacaacttcgagattgtagatatgggcgtg
atggttcctgcgcaagatatcatcaaaaaagccaaagaaattaatgccgatattattggt
ttaagcggattaattacgccatcgctggatgaaatggttcattttgccaaggaaatggaa
cgcgaaggcttcaccataccgttaattattggcggcgcaaccacatcccgcattcatgcc
gccgtaaaagtggcgccaaattattcaggtcccgctatacacgttttggatgcatcgaga
agtgtaaccgtttgcagcaccttgatgaaccctgaaacgaaaggcgattatgttgccgga
attaaggccgagtacgaaaaagcacgagaggcgcatttaaacaaacggtctgataagcgt
tttaaaacgattgacgaagcccgcgaaaacaaatttaagatcgatttcgatcgaaacctt
cctgttccggaatttacaggaacacgggtttttgataactatcctttagaagaattggtg
ccttatatcgattggacaccgtttttccacacctgggaacttcgcggaagctaccctaaa
atattcgatgataagaacgttggcgatgaggctaaaaagcttttcgacgatgcacaaacc
ttgctgaaacggattttggatgaaaaattattgaccgccaggggcgttattggtttttgg
ccagcaaattcggttggagacgacattgagttgagagttgggagtgttgagttgggagat
tccaaactccaagctccaagccccaagctaacaactatccacaccctccgccagcaagca
gaaaaagtagatgggcaaccctattatgcgttatctgatttcattgcaccaaaagaaagc
ggaatacaggattatttcggtggttttgccgtaacaacgggcatcggaattgatgagttg
gtggctgaatttgaagcaaaccacgacgattataatagcatcatggcaaaagccttggcc
gatcggttggccgaagcatttgctgagcggatgcacgagcgggttcgtaaagaattttgg
ggttatgccaaaaatgaaaacctcaataatcaagaattaatcaaagaagaatacgcaggg
attcgtccggcgccaggttatccagcctgtcctgagcataccgaaaagggaaccttgttt
gaattgctcgatgcggagaaccaaattgggcttcgactgacagaaagctacgccatgtat
ccaacggctgcggtaagcggattttattttgcgcatccagattcaaggtactttggcctg
ggtaaaattacaaaagatcaggtagaggattatgcagtgcgaaagaacatgtcgatagac
gaagtagaaagatggcttagccccaatttggcctattaa

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