Pedobacter endophyticus: IZT61_11135
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Entry
IZT61_11135 CDS
T07452
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pex
Pedobacter endophyticus
Pathway
pex01501
beta-Lactam resistance
pex01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_11135
01503 Cationic antimicrobial peptide (CAMP) resistance
IZT61_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pex03036
]
IZT61_11135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_11135
01504 Antimicrobial resistance genes [BR:
pex01504
]
IZT61_11135
Chromosome and associated proteins [BR:
pex03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IZT61_11135
Transporters [BR:
pex02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IZT61_11135
Antimicrobial resistance genes [BR:
pex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IZT61_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
OEP
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
QPH37670
UniProt:
A0A7U3Q4T2
LinkDB
All DBs
Position
complement(2757080..2758249)
Genome browser
AA seq
389 aa
AA seq
DB search
MRKVTTLFFTVSIGMLLASCGNNDDSKKAAAAAAAGPQPYPVFSVEAQTTALNSDYPATI
EGIQNIDIRPKVDGFIQQILVDEGQRVKKGQLLFTIMAPQYEQEVRTAKAAISSAEADVN
AAQLQVNKTKPLVEKDIISKYDLDAAQLTLQSRKAALAQARATLVNAQVNLGYTRITSPV
DGIVGSIPFRTGSLVSSQSTEPLTTVANTSKVYAYFSLNEKQLLDFSNVYKGNNLAQQMA
NIPAVSLVLPDGTVYAENGKIESINSQINTTTGSARLRATFPNPIALLKSGGSASVRIPQ
KVENAILIPQKSTIDLQGKKFVYVLGDSAKVVSTEIQIMDLAKDKFYVVTKGLKAGNKIV
LEGFQSLKDGMKIKPQETPADSVYAEIRK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtaacaactctctttttcaccgtgagcataggtatgcttctggcatcctgc
ggaaataacgatgattcaaaaaaggcagcagctgcggcggcggctggcccacaaccttat
cctgttttttcggttgaggcacaaacaactgcgctaaactccgattatcctgcaaccatt
gaagggattcaaaacattgatatacgcccaaaggttgatggatttattcagcagatattg
gttgatgaaggtcagcgggtaaaaaaaggacagttgctgtttaccatcatggcaccgcaa
tacgaacaagaagtaagaacggcaaaagcagccattagcagtgcagaggccgatgttaac
gccgctcagttacaggttaacaaaaccaagccccttgtagaaaaagatatcattagtaaa
tacgatttagacgccgctcaacttacactacagagcagaaaggccgctttggcacaagcc
agagcaactttggtaaacgcacaggtaaacctcggttatacccgcattaccagcccggtt
gatggaattgtgggcagcatcccgttcagaacaggaagtttggtaagcagccagagcact
gagccgttaacaaccgtcgcaaatacatcaaaagtttatgcttacttctcgttaaacgaa
aagcaacttttagatttctcgaacgtttacaaaggaaataacctggctcagcaaatggcg
aacatcccggcggtaagtttggtgcttcctgatggaaccgtatatgcagaaaacggaaaa
atcgaatcgataaacagccagatcaataccacaacgggttcagcgagattaagggctacc
tttccaaaccccattgccttgttaaaatcgggcggaagcgcctctgttagaattccacag
aaggttgaaaatgcaattttgattccgcagaaatcgaccatcgatttacagggaaaaaaa
ttcgtttatgttctcggcgattcagcaaaagtggtgagcaccgaaattcagattatggat
ttagcgaaagataagttctatgtagtaaccaagggactaaaagcgggaaataaaattgtt
ttagagggctttcaatcgttaaaagatggcatgaagattaagccacaggaaacgcctgct
gattcggtgtacgctgaaataagaaaataa
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