Pedobacter endophyticus: IZT61_15835
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Entry
IZT61_15835 CDS
T07452
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pex
Pedobacter endophyticus
Pathway
pex01501
beta-Lactam resistance
pex01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_15835
01503 Cationic antimicrobial peptide (CAMP) resistance
IZT61_15835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_15835
01504 Antimicrobial resistance genes [BR:
pex01504
]
IZT61_15835
Transporters [BR:
pex02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IZT61_15835
Antimicrobial resistance genes [BR:
pex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IZT61_15835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
Motif
Other DBs
NCBI-ProteinID:
QPH38543
UniProt:
A0A7U3SPI5
LinkDB
All DBs
Position
complement(3892456..3895566)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSISTTSIKRPVLAIVMNLLIVLFGIIGYTFLGVREYPSIDPTVVSVRTSYPGANSDIIE
SQITEPLEKSINTIDGIRNISSSSNQGASNITIEFDLDKNIEEAANDVRDKVSQAARTLP
KDIDGLPTVSKADANSDDILSMTIQSDKRNTLELSDFAENVIADRIQTIPGVSTVQIRGQ
RKYAMRIWMDPNKLSAYGLTSQDIVTALDNENVELPSGKITGATTELTVKTLGKLTNEEE
FNNLILKSDSNQVVKLKDVGYAILGSENEETILRESGLPMVSISIIPQPGANYIDITQEF
YKRFDKLKADMPKDIKLAVSSDNTIFIKRSVTEVAETIGLSLVLVILIIYLFFRDWAIAF
RPLIDIPVSLIFTFFIMYAFGFSINVLSLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP
FEAAIKGSNEIFFAVISISVTLAAVFLPVIFLQGFVGRLFREFGVVIGAAVLISAFVSLT
LTPMLNAYLMKKGGHTPSRFYNWTEPYFVKLNDSYAHNLNKFLDKRWLSIPIIIVCMGLI
FLFWKLLPKETAPYDDRSAINMTATLPEGASFTATDEFIMKLNQLVIDSVPEKNVNITIT
SPNFGGAGSTNMGFVRMGLVDPEDRTRSQKEIADMLTRVTKKYSEGKVIISQQPTISVGR
RGGLPISYIIQAQNFEKLREKVPLFMEEVAKDPTFTVSDVNLKFNKPEINLTIDRDKAKN
LGVSISAIAQTLNLGLSGQRFSYFFMNGKQYQVIGQFDRTDRKDPLDLSSVYVRSDKGQL
VQLDNLVTAREESSPPQLYRNNRFISATISAGLAPGKSIGEGIDAMDAISKKVLDETFST
DLSGESRDFKESSSNTFFAFGLALLLVYLILSAQFESFKDPIIIILTVPMAVAGAFLSLW
LCGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKEKGVAIPEAIREASVSRLRPILMT
SLAIAIGALPIALALGAAAKSRMSMGTVIVGGTLFSLVLTLFVIPAIYSYWAKPYKPNKE
LKDAHRFEQEALHTAE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctccacaacgagtataaaaagacccgttctcgccatcgttatgaaccttttg
atcgtccttttcggcatcattggttatacgtttttgggcgttcgcgaatatccgtccatc
gatccaacagtggtatcggtacgtacttcctaccctggggcaaattccgatattatcgag
tcgcagattaccgaaccattagaaaaatcgatcaataccattgatggaatcaggaatatt
tcatcgtcgagtaaccagggagcaagtaatatcactattgagttcgatcttgataagaat
attgaagaagccgcaaatgatgtacgcgataaagtttcgcaagccgcaagaacattgcca
aaagatattgatggcttgccaacggtaagtaaggccgatgcaaattcggacgacatctta
tcgatgacgattcaaagtgataagagaaacacgttggagttgagcgattttgcagaaaac
gtaattgccgaccgcatccaaaccattcctggcgtaagtaccgtacaaattcgcggccag
agaaaatatgccatgcgtatatggatggaccccaataagctgagtgcttatgggttaacc
tcgcaagatattgtaacggcacttgataacgaaaacgtcgaactgccatccggaaagatt
accggcgccactaccgagcttaccgttaaaaccctcggtaaactaacaaatgaagaagaa
tttaacaaccttatcctcaaatcagacagcaatcaggtagtaaagctcaaagatgtaggc
tatgccattttaggatccgaaaatgaggagactatcttacgagaatcgggcctgccaatg
gtttccatttccattatcccgcaaccaggtgcaaattacatcgacattacccaagagttt
tacaagcgttttgataagttaaaggccgatatgcccaaagatatcaagctggccgtttcg
agcgataataccatttttattaaacgatcggtaacagaagtggcagaaaccatagggctg
tcgttagtgttggtaatcctgatcatttatctgttctttagagattgggccatagccttc
aggccattgattgatattcccgtatcgctcatcttcaccttttttatcatgtatgccttt
gggttttctatcaacgtattaagcttgctggccattgttttggcaacgggactcgtagtt
gatgatggtatcgtggtaaccgaaaacatctttaaaaaggtagaagaaggcatgtcgccc
tttgaggccgcaataaagggctcaaacgagatcttttttgccgtaatctccatttccgtt
acattggcggcggtatttttgcccgtaatcttccttcagggatttgtgggcaggttattt
agggagttcggggtggtaattggtgcggcggtgctcatttccgccttcgtatcgctcacc
ttaacgccaatgttaaacgcttatttaatgaaaaaaggcggccatacaccgtctcgtttt
tacaactggacggagccttattttgtgaagctaaacgattcctacgcccacaacctgaac
aagtttttggataaaagatggctttccatccccattattatagtttgtatgggcctcatt
tttctcttttggaagttattgccgaaggaaacggctccatacgatgatagaagtgccatt
aacatgacggcgacgttgcccgagggggcatcctttacagctacggatgagtttattatg
aaactgaaccagttggtaattgattctgtacctgaaaaaaacgtaaacattaccatcacc
tcccctaatttcggtggcgcaggctctactaatatgggctttgtaaggatgggccttgta
gaccctgaagacagaacacgctcgcaaaaggaaattgccgacatgttaacccgagtgacc
aaaaaatattcggagggcaaagtaatcatcagtcaacaacccaccatttcagttggtcgc
cgaggcggtttgccaatcagctacattattcaggcacaaaatttcgaaaagctccgcgaa
aaggttccattgtttatggaggaggttgcaaaagaccccaccttcaccgtttctgatgtc
aacctgaagtttaataagccagagatcaacctgaccatcgatcgcgataaggccaaaaac
cttggcgtttccatttcggccattgcacaaaccttaaatctgggcttaagcggtcaacgt
ttttcttatttctttatgaatggaaaacaatatcaggtaattggtcagtttgatcgtacc
gaccgtaaagacccgcttgatttgagctcagtttacgttcgtagtgataagggccagctt
gttcaactcgataacctggtaaccgcccgcgaggaaagtagccccccgcagttataccgc
aataacaggtttatctctgccacaatttctgctggcctggcccccggaaaaagtattggc
gagggtatcgatgccatggacgctatttcgaaaaaagttttagatgaaaccttctctacc
gatttgagtggcgaatcgagagatttcaaggaaagttcgtccaatacatttttcgcattt
ggtttagcgctattactggtttacctcatcctctcggcccagttcgaaagttttaaagac
ccgattattatcattttgaccgtaccaatggccgttgccggagcatttttatcgctgtgg
ttatgtggccaaagctggaatatttttagccagattggtaccatcatgctaatcggttta
gttaccaaaaacggtatcctcattgtcgaatttgccaatcagctcaaagagaaaggtgta
gccatacccgaggcaataagagaggcgtctgtgtcgcgtttacgaccgattttaatgacc
agtttggccattgctattggagcgcttcctattgcacttgccctgggcgcagcagcaaaa
agcagaatgagcatgggaaccgtaattgttggtggaactttgttttcattggttttaacc
ctttttgtaatccctgccatttactcgtactgggccaagccatataaacctaataaagaa
cttaaagacgcccatcgttttgaacaggaagccttacatacagcagaataa
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