Pedobacter endophyticus: IZT61_16010
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Entry
IZT61_16010 CDS
T07452
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IZT61_16010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pex01007
]
IZT61_16010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pex03016
]
IZT61_16010
Enzymes [BR:
pex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
IZT61_16010
Amino acid related enzymes [BR:
pex01007
]
Aminoacyl-tRNA synthetase
Class I (U)
IZT61_16010
Transfer RNA biogenesis [BR:
pex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IZT61_16010
Prokaryotic type
Other AARSs
IZT61_16010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QPH38577
UniProt:
A0A7U3Q4S9
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All DBs
Position
complement(3949241..3952642)
Genome browser
AA seq
1133 aa
AA seq
DB search
MYSEFKQLELAKIGQEILDFWKKENIFEKSISSRPKSNPFTFYEGPPSANGMPGIHHVMA
RAIKDIFCRYKTLKGYQVKRKGGWDTHGLPIELAVEKKLGITKEDIGKKISVDEYNAACR
TEVMRYTDVWNDLTEKMGYWVDLENPYITYENKYIETLWWILKQLYDKGFLYKGYTVQPY
SPAAGTGLSSHELNQPGTYKDVSDTTIVAQFKAIDESLSAFLKDFGTIHFLAWTTTPWTL
PSNTALTVGPKIDYVLVKTFNQYTFEPINVVLAKALVGKQFAGKYFLSENDEDFNNFKAD
DKKIPYVILAECAGADLVGIRYEQLLPYALPYQNAENAFRVISGDFVTTEDGTGIVHTAP
TFGADDARVAKLATPEVPPMLVLDEKGNAVPLVDLQGKFIASLGGNYGGKYVKNEYYKDG
EAPEKSVDVEIAIQLKEENKAFKVEKYVHTYPHCWRTDKPVLYYPLDSWFIKTTAVKDKM
AQLNKTINWKPESTGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRTADGLEEKCIGSIAE
LNAEIAKSIEAGLMPAGFELKDMHRPYVDDVILTSSKGEKMTRETDLIDVWFDSGAMPYA
QWHFPFENKEEFENAYPADFIAEGVDQTRGWFFTLHAIAVMLSEASDEIREINAKTGNPG
IAFKNVVSNGLVLDKNGNKMSKRLGNAVDPFSTIETYSADATRWYMISNASPWDNLKFSL
EGLDEVRRKFFGTLYNTYAFFALYANIDKFEIDKNNLSKVADRTELDRWILSLLQNLISE
VDESYNAYEPTKATRAIQTFVDEHLSNWYIRLSRRRFWKGEMTDDKRAAYETLYTCLETL
AQLMSPVAPFFADWLYKNLTVTDKNAQQSVHLTLWNEADKSLIDTDLNERMVYAQDISSM
VLSLRKKSGINVRQPLAKILIPSLNGDFEQKISKVSDYILSETNVKHIEFITDTHGIVKK
KLKPNFKSLGKKVGKDMSIVKQALENMTQDDIQRLEVDGYINVFGTDNVQHAIDMNDDVE
VFAEDIPGWQVTNIGSLTVALDVTISEELKQEGISRELVNRIQNLRKELNFEVTDRINVA
LQNDNLIAAAVTKNIAYICAEILADKLELTDTVTNANKITIDDVELSISVTKI
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcgaatttaaacaattagaacttgccaaaatagggcaagaaatattagatttt
tggaaaaaggaaaacatcttcgaaaagagcatttcttcacgtccaaaatctaatccgttt
actttttacgaaggaccaccgtctgccaatggcatgccgggcattcaccacgtaatggct
cgtgcaattaaggatattttttgtcgatacaaaaccttaaaaggctatcaggttaagcgc
aaaggcggttgggatacccatggtttgcccattgagcttgccgtagaaaaaaaactgggt
ataaccaaagaagacattggcaaaaaaatcagtgttgatgaatacaacgcagcctgccgt
accgaggtaatgcgatataccgatgtttggaacgatcttaccgaaaaaatgggttactgg
gtcgaccttgaaaatccatacatcacttacgaaaataaatacattgaaaccctttggtgg
atcttaaaacaactttacgacaaaggatttttatacaagggatacacggttcaaccttat
tcgcccgctgccggaacaggtttaagctcgcacgaactaaaccagcctggcacttacaaa
gatgtaagcgataccacaattgttgcacagttcaaagcaattgacgaatctctgtctgcg
ttcttaaaagacttcggcacaattcactttttggcatggacaacgacgccctggacgtta
ccgagcaacacggctttaacagttgggcctaaaattgattatgtgctggttaaaaccttc
aatcaatacactttcgagccaatcaatgttgttttggctaaggcacttgttggtaagcaa
tttgctggaaaatactttttatctgaaaacgacgaagattttaacaacttcaaggccgac
gataaaaagattccttatgttattttagccgaatgtgctggtgcagatttggtagggatc
agatatgagcaattattgccttatgcacttccctatcaaaacgccgaaaatgccttccgg
gttatttctggcgactttgtaaccaccgaagacggtacaggtatcgttcataccgctcca
acttttggcgctgatgatgcccgagtggcaaaattggccacacctgaagtgccaccgatg
ttggttttagatgaaaagggaaatgcagtaccgttggttgatttacaagggaagtttatc
gcttctttaggtggaaactatggcggtaagtacgtcaaaaacgaatattataaagatggt
gaagctcctgagaaatcagttgatgtagaaatcgcgatccagttaaaagaagaaaacaaa
gccttcaaggtagaaaaatacgttcacacttatccacactgctggagaaccgataaaccg
gtgttgtattatcctttagatagttggttcattaaaactaccgctgttaaagataaaatg
gcccagttgaacaaaaccataaactggaagcccgaatcgacgggaaccggccgttttggc
aactggctggagaatttggttgattggaacctttcccgttctcgttattggggaacgcct
ttgcctatttggcgtactgccgacggtttagaggaaaaatgcattgggtcgatcgcagaa
ctgaacgcagaaatagcgaaatctatcgaagcaggtcttatgcctgcaggtttcgaattg
aaagacatgcaccgcccttacgttgatgatgtgattttaacttcatcaaaaggggaaaaa
atgacgcgtgaaaccgacctaatcgatgtttggtttgatagcggcgcaatgccgtatgca
caatggcatttccctttcgaaaacaaagaagaatttgaaaacgcctaccctgccgatttt
atagcagaaggagttgaccaaacacggggctggtttttcaccttacacgccatcgcggta
atgttgagcgaggcgagcgatgagattagggaaattaatgcaaaaacaggaaacccgggt
atagccttcaaaaatgtagtttcaaacggattggtgttagataaaaatggcaacaaaatg
tctaagcgtttaggcaatgctgttgatcctttcagcaccatcgaaacttacagcgctgat
gccacccgctggtacatgattagcaatgcatcgccctgggacaacttgaaattcagctta
gaaggattggatgaagtgcgccgtaaattcttcggcacactgtacaatacttatgcattt
tttgccttatacgcaaatatcgacaagtttgagatcgacaaaaacaacctgagcaaagtt
gccgacagaacggagctggatcgttggatcttatctttattgcaaaatctgattagcgaa
gtagacgaaagctacaatgcttacgagccaaccaaagccacccgtgccatccaaaccttt
gttgatgagcatttgagcaactggtacattaggttgagccgtcgccgtttttggaaaggc
gaaatgacagatgataaacgtgcggcttacgaaacactttatacctgtttggaaacgttg
gcccagctgatgagccccgttgcacctttctttgccgattggttgtataaaaacttaacc
gtaacggataaaaatgcacaacaatctgttcacttaaccctgtggaacgaggctgataag
agcttaattgatactgatttgaacgagcgtatggtttacgcccaggatatttcgtcgatg
gttttatcgctgcgtaaaaagtcgggcattaacgttcgtcagcctttggctaagatcctg
attccatcgctaaatggcgatttcgagcagaaaatctcaaaggtttccgactacattctt
tcagaaaccaatgttaagcacatcgagtttattaccgatacgcatggcattgtaaagaaa
aagctgaagccaaattttaaatcgcttggtaaaaaagtgggtaaggatatgagcattgtc
aaacaggcgctggaaaacatgactcaagacgatattcaacgtttagaggttgacggttac
atcaacgttttcggtaccgacaacgttcagcatgcgatagatatgaatgatgatgtggag
gtttttgctgaagatattccggggtggcaggtaaccaacatcggtagcttaactgttgcc
ttagatgtaaccatttctgaggagctgaaacaagagggaatttctcgcgagttggtaaac
aggatccagaatttacgtaaggaactaaacttcgaagtgaccgatagaattaacgtggct
ttacaaaatgataatctgatagcggccgcggtgacgaaaaacatagcgtacatttgcgca
gaaattttggccgacaaactagaattaacagatactgtaactaacgcaaacaaaatcact
attgatgatgttgagttaagcatttcggtaactaaaatataa
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