Pseudomonas eucalypticola: HWQ56_07920 Help Entry HWQ56_07920       CDS       T07251                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pez  Pseudomonas eucalypticola Pathway pez03030   DNA replication pez03410   Base excision repair pez03420   Nucleotide excision repair pez03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pez00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HWQ56_07920 (ligA)    03410 Base excision repair     HWQ56_07920 (ligA)    03420 Nucleotide excision repair     HWQ56_07920 (ligA)    03430 Mismatch repair     HWQ56_07920 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pez03032]     HWQ56_07920 (ligA)    03400 DNA repair and recombination proteins [BR:pez03400]     HWQ56_07920 (ligA) Enzymes [BR:pez01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HWQ56_07920 (ligA) DNA replication proteins [BR:pez03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HWQ56_07920 (ligA) DNA repair and recombination proteins [BR:pez03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HWQ56_07920 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      HWQ56_07920 (ligA)    MMR (mismatch excision repair)     DNA ligase      HWQ56_07920 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HWQ56_07920 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  QKZ03714 UniProt:  A0A7D5D5H9 LinkDB All DBs Position 1711536..1713887 Genome browser AA seq 783 aa AA seqDB search MTAANTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFRELKELEAAHPDLVTADSPTQ RVGNVALTAFSQVRHEIPMLSLGNAFEETDMREFDRRVNEGLDLPVGDLFGGGAAVEYSC EPKLDGLAVSLLYQDGLLVRGATRGDGTTGEDISVNVRTIRNVPLKLHGSGWPATLEVRG EVFMSKAGFERLNEGQMEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGLGQVSE NIAETHIGNLEKLKTWGMPISRELKLAKGIDECLAYYRDIGERRNALAYEIDGVVFKVNS LASQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTV ANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVMQVVTERRPENARPVHIPETCPVCGS HVERTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGEKSVEQ LVDEGLVSSPADLYILTPEQIIDLEGFAEVSTRKLLDAIAASKRPTLARFIFALGIPDVG EETAKVLARSLGSLERIMVALPQVLTYLPDIGLEVAYEIHSFFEDPHNRNVIAELLGHGL ELQDQGDVHAEFAASTSLAGLIAKLDINSVGPTGAEKLVAKLGSLDKIIAADGIDLRQAL AAKQADAVRDYFRDPANAERALKLEQQLQAFGMHWASEKKVVEGLPLAGQTWVLTGSLER MSRDVGKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLTKANELGIKVLDEDAFIALLEA HGG NT seq 2352 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgccaacacccggatcctcgagctgcgcgccgaactggaccagcacaactac cgctaccacgtgctcgatgaaccgagcatcccggacgccgagtacgaccgcctgttccgc gaactcaaggaactggaagccgcgcaccccgacctggtgaccgccgactcgccgacccag cgcgtgggcaacgtggccctgaccgcgttcagccaggtgcgccacgaaatccccatgctc agcctgggcaacgccttcgaagaaaccgacatgcgcgagttcgaccgccgggtgaacgaa ggcctggacctgccggtgggtgacctgttcggtggcggcgcggcggtggaatacagctgc gaacccaagctcgatggcctggccgtgagcctgctgtaccaggacggcctgctggtgcgc ggcgccacccgcggcgacggcaccaccggtgaagacatcagcgtcaacgtgcgcaccatc cgcaacgtgccgctcaagctgcacggcagcggctggcccgccaccctggaggtgcgcggc gaagtgttcatgtccaaggccggtttcgaacgcctcaacgaagggcagatggaagtgggc ggcaagaccttcgccaacccgcgcaacgccgccgccggcagcctgcgccaactggactcg aagatcaccgccagccggccgctggaattctgctgctacggcttgggccaggtctcggaa aacatcgccgagacccacatcggcaacctggaaaaactcaagacctggggcatgcccatc agccgcgagctgaaactggccaagggcatcgacgagtgcctggcgtactaccgcgacatc ggcgagcgccgcaacgccctggcctacgagatcgacggcgtggtgttcaaggtcaacagc ctggccagccagcgtgagctgggcttccgcgcccgcgaaccgcgctgggctatcgcccac aagttcccggccatggaagagctcaccgagctgctggacgtggaattccaggtgggccgt accggcgccgttaccccggtcgcgcgcctgaagccggtgaaggtggccggcgtgaccgtg gccaacgccaccctgcacaacatggacgaagtggcgcgcctgggtctgatgatcggtgac accgtgatcatccgccgtgccggcgacgtgatcccccaggtgatgcaggtggtcaccgag cgccgcccggaaaacgcccgccctgtgcacatccccgaaacctgcccggtgtgcggctcc cacgtggagcgcacgcaactggtcaagcgcagcaagggcaaggaaaccgtcagcgaaggc gcggtataccgctgcgtcggccgcctggcctgcggggcgcaactgaagcaggcgatcatt cactttgtgtctcgccgcgccatggacatcgacggcctgggcgaaaaaagcgtcgaacaa ctggttgacgaaggcctggtgagctcgccagcggacctgtacatcctcacgcccgagcag atcatcgacctggaaggcttcgccgaggtgtccacccgcaagctgctggacgccatcgcc gccagcaagcggccgaccctggcgcgcttcatctttgccctgggcattcccgatgtaggc gaggaaaccgccaaggtgctggcccgctccctgggctcgctggagcgcatcatggtggcg ctgccccaggtgctgacctacctgcccgacattggcctggaagtggcctacgaaattcac agcttcttcgaagacccgcacaaccgcaacgtcatcgctgaattgctgggccatggcctg gaactgcaagaccagggtgatgtacacgccgaattcgccgccagcaccagcctggccggg ctgatcgccaaactggacatcaactcggtaggccccaccggcgccgagaaactggtggcc aagctcggcagcctggacaagatcatcgccgccgacggcatcgacttgcgccaggccctg gccgccaagcaggcggacgcggtgcgcgattacttccgcgacccggccaatgccgagcgg gcactgaagctggaacagcagctgcaagccttcggcatgcactgggccagcgagaaaaag gtcgtcgaaggcctgccgctggctggccagacctgggtgctcaccggcagcctggagcgc atgagccgcgacgtgggcaaggaaaaactggaaagcctgggcgccaaggtggccggttcc gtgtcggccaagacccattgcgtggtcgcagggcccggtgcgggctccaaattgaccaag gccaacgaactgggcatcaaggtcctggacgaagacgcgttcatcgccctccttgaagcc cacggcggttga

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