Plasmodium falciparum 3D7: PF3D7_0819900
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Entry
PF3D7_0819900 CDS
T00095
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3, putative
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_0819900
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_0819900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_0819900
03041 Spliceosome [BR:
pfa03041
]
PF3D7_0819900
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PF3D7_0819900
mRNA degradation factors
5'-3' decay
Lsm complex
PF3D7_0819900
Spliceosome [BR:
pfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PF3D7_0819900
Complex C
U2 snRNP components
PF3D7_0819900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
CCDC146_C
BioT2
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
2655500
NCBI-ProteinID:
XP_002808862
PlasmoDB:
PF3D7_0819900
UniProt:
C0H4W2
LinkDB
All DBs
Position
8:complement(join(899004..899078,899223..899312,899443..899528,899633..899657))
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AA seq
91 aa
AA seq
DB search
MEKIALIQNPLDYIRLNMEEEIFLKCKGDRELIGKLDAYDNHLNMILSNVRETYKYSVKE
NDEETVKKMERNLDMVFVRGDSIILVSSAMK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatagcattaatacaaaatcccttagattatattcgtttaaatatggaggaa
gaaatatttttaaaatgtaaaggagatagagaactcattggaaaattagatgcttatgat
aatcacttaaatatgattttatccaatgtacgtgagacttataaatatagcgttaaagaa
aatgatgaagaaacagtcaagaaaatggaaagaaatttagacatggtttttgttagagga
gattctattatcctagtatcatctgctatgaaataa
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