Plasmodium falciparum 3D7: PF3D7_1434000
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Entry
PF3D7_1434000 CDS
T00095
Name
(RefSeq) CCR4-associated factor 16, putative
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_1434000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_1434000
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PF3D7_1434000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
RsgA_GTPase
Septin
Arf
AAA_15
AAA_18
AAA_22
Zeta_toxin
Dynamin_N
Sigma54_activat
DnaB_C
AAA_14
ATP-synt_ab
MMR_HSR1
AAA_24
FtsK_SpoIIIE
AAA_25
AAA_28
Motif
Other DBs
NCBI-GeneID:
811903
NCBI-ProteinID:
XP_001348495
PlasmoDB:
PF3D7_1434000
UniProt:
Q8ILC3
LinkDB
All DBs
Position
14:complement(join(1364749..1364774,1364900..1364988,1365087..1365233,1365346..1365580,1365714..1365813,1365937..1366113))
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AA seq
257 aa
AA seq
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MNEIVINNLNYNYYNGIQRTRIKALQNVNLCFERGMRILVCGKNGAGKSTLLSIIAGKKL
IKENEVLIFNKQAFHDTDISNKIGYVGEWWSEEYAMNISIKDFCFNYEYTKRYKNLLKLF
ELDENKIISNLSKGERKKVQIMVNIIVRKDIYIFDEATESLDLVSRKLLLEFLKKECIKY
NSIVIYSTHIFDHMDKWSTHVLYLSEGIVTFFSNIYNITNLENYSSLAEYICDHMVEEIK
KKENVDKLDDLLLIDSD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatagtaattaataatttaaattataattactataatggaatacaaagaaca
cgtattaaggctttacaaaatgtcaacttatgttttgaaaggggtatgaggatattggtt
tgtggaaaaaatggtgcaggaaaaagtacattattgagtatcatagcaggaaaaaagttg
attaaggaaaacgaagtactaatatttaataaacaggcttttcacgacacggacatatct
aataaaataggttatgttggagaatggtggagtgaagagtatgccatgaacattagcata
aaagatttctgcttcaattatgaatatactaaaagatacaaaaatttattaaaattattc
gaactagacgaaaataaaattatatcaaatctttccaaaggtgaaagaaaaaaggttcaa
atcatggttaatataattgtgagaaaagatatttatatatttgatgaggctactgaatct
ctggatttggtatcaaggaaattattactagaatttttaaagaaagaatgcataaaatat
aatagcattgttatatactcaacgcatatttttgatcatatggataaatggtctactcac
gttctctatctttctgaaggaatagttacctttttttccaacatttataatattacaaat
cttgagaattattcttccttggcggaatacatttgtgaccacatggtggaggaaattaaa
aaaaaggaaaatgtcgataaattggacgatctcctcttaatcgattcagattaa
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