Phascolarctobacterium faecium: PFJ30894_01312
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Entry
PFJ30894_01312 CDS
T05784
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFJ30894_01312 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_01312 (nth)
Enzymes [BR:
pfac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PFJ30894_01312 (nth)
DNA repair and recombination proteins [BR:
pfac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFJ30894_01312 (nth)
Prokaryotic type
PFJ30894_01312 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF763
Motif
Other DBs
NCBI-ProteinID:
BBG63679
LinkDB
All DBs
Position
1304886..1305518
Genome browser
AA seq
210 aa
AA seq
DB search
MRKQQREAILALLEETYMGTETALNYSTPFELLVAVIMSAQCTDERVNKITARIFPKYNT
PEKMGALSQEQLEEEIRDCGLFRSKAKNLLATCKMLTEEYNSVIPDTVEELMKLPGVGKK
TANVVASIVYKVPAIAVDTHVFRVSHRLGLAKGDDPLAVEKELQKAIPKNKWSDAHHWLI
WHGRKICKARKPLCSECVLVELCPYKEKNL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaacaacaacgtgaggcaattttagcgctgctggaagaaacttatatgggtacg
gaaacagcgctgaactattcgacgccttttgaattgttagtagcggtaattatgtcagcg
caatgtacggacgaacgtgtcaataagattacagcacgtattttcccgaaatataatact
cctgaaaaaatgggcgcactttctcaggaacagctggaagaagagattcgtgactgtgga
ctgttccgatcgaaggctaaaaatctgctggcaacctgtaaaatgctgacggaagaatat
aacagcgttattcctgacactgtcgaggagctgatgaagctgccgggtgtgggtaaaaaa
acggctaatgttgtcgccagtattgtttataaggttccggcgattgcggttgatacccat
gttttcagagtttcgcaccggttgggtttagctaagggcgatgatccgctggcagtggag
aaagagctgcagaaagccattccgaagaataagtggagcgatgctcatcattggttgatc
tggcatggccgtaagatttgcaaggcaaggaaacctttatgcagtgaatgcgtattggta
gaattgtgtccatacaaggaaaagaatttataa
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