Planococcus faecalis: AJGP001_02160
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Entry
AJGP001_02160 CDS
T04955
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pfae
Planococcus faecalis
Pathway
pfae00300
Lysine biosynthesis
pfae00550
Peptidoglycan biosynthesis
pfae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AJGP001_02160
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AJGP001_02160
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfae01011
]
AJGP001_02160
Enzymes [BR:
pfae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AJGP001_02160
Peptidoglycan biosynthesis and degradation proteins [BR:
pfae01011
]
Precursor biosynthesis
Amino acid ligase
AJGP001_02160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Peripla_BP_6
DUF1611
Motif
Other DBs
NCBI-ProteinID:
AQU78179
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Position
413118..414617
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AA seq
499 aa
AA seq
DB search
MDIQLCTIPSFPILMQFGPEKSTISSIEYNSTLVTPGCAFFCVLGEHTDGHLYINEAIAG
GATTIIGSDKLLLTEHAKKQPNLSFAVVADVRMALAYMSDFFYHSPQEDLIKVAVTGTNG
KTTTATYVYDLFNLLGISSGFIGTTGILRTDGKIPFFKSTPTTPISSDLHKIFARFVLEK
DRAVAMEVTSIALDQKRVEGIRFDVAIHTNISEEHLEYHKTFDHYLQSKLMLFKQSKAAV
INMDDEGMAKEILEVVHYPHLTYSNQMDSSADLIWTACESSDTGLKFDLYYEEECWPIHV
PLFGEYNAANLTAAIGAALLSGVRIEEILAVLPKMSQVEGRFQVIQGPENRKIILDYAHT
PVALSAVLQEVKKLSHNRLIALIAGIGIRDFSKMPKMAKAAEGKADVLVVTVDHPGSHEP
SLVIDAVLKGFTVPYKQRVVTAESRREAVLAALQESGPDDLVLLSSGSINGAQIVKGKYI
PHSDEAIIEEFFSSKTSDF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatatacaactttgcacaattccttcttttccgatccttatgcaatttggacctgaa
aaatcaacaatcagctcgattgagtacaattccacattagttactccaggttgtgctttc
ttttgcgtgcttggcgaacacacagatggacatttatatatcaacgaggccattgctgga
ggagccacaacaattataggatccgataaactgttactaactgaacatgcaaaaaaacaa
cccaatctatctttcgcggtagttgcggacgttcggatggcacttgcctatatgtctgat
tttttttatcactcgcctcaagaagatttaatcaaggttgctgttacgggaactaatggt
aaaacaactacagctacttatgtctacgatttgttcaatcttcttggcatttccagtgga
tttatcgggacgaccggaattttaagaacggatggcaagattcctttttttaaaagcact
cccacgacgccaatttcttctgatctccataaaatttttgcgcgttttgtattggaaaaa
gatcgtgcagtagcaatggaagtcacttctattgcattagatcaaaaacgcgtcgaaggg
attcgttttgatgtagcgattcataccaacatttcggaagagcatttggaatatcataag
acatttgatcattaccttcaatccaaattaatgttgtttaaacagtctaaagcggctgta
atcaacatggatgacgaaggcatggctaaagagattttggaggttgttcactatcctcat
ttaacatacagcaaccaaatggattctagtgccgatttgatttggacggcttgtgaatct
tcagacacgggcttgaaatttgatttatattacgaagaggagtgttggccaattcacgta
cctcttttcggcgaatacaatgcggccaatttaacggcggcgattggtgcggctctttta
tcgggcgtccgtatagaagagattttggcggttttgccgaagatgtctcaagtggaaggg
cgctttcaagtaatccaaggtcctgaaaatcggaaaatcatcttggattatgcccataca
cctgtcgccttgtcggccgtcttgcaagaagttaagaaattatcgcataatcgactgatt
gcacttatcgcaggtattggtatacgggatttttcgaaaatgccgaagatggccaaagca
gctgaaggcaaagcggatgttcttgtggtaactgtggatcatcctggttctcatgagccc
agcttagtaattgatgcggtgttaaaaggctttacagtaccttacaagcaacgcgtagtg
acagcggagtcgaggcgtgaggcggttctagcagctcttcaagaaagtggaccggatgat
ttagtactgctatccagtggctcaatcaacggagcgcaaatcgtcaaaggaaaatatatt
ccgcattctgatgaagcaattatagaagaatttttcagtagcaaaaccagcgacttttaa
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