Pseudomonas fakonensis: KSS94_05905
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Entry
KSS94_05905 CDS
T07698
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfak
Pseudomonas fakonensis
Pathway
pfak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS94_05905 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfak03400
]
KSS94_05905 (nth)
Enzymes [BR:
pfak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KSS94_05905 (nth)
DNA repair and recombination proteins [BR:
pfak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KSS94_05905 (nth)
Prokaryotic type
KSS94_05905 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QXH52664
LinkDB
All DBs
Position
complement(1288804..1289442)
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AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRLHEDNPEPKTELAYTTPFELLIAVILSAQATDVGVNKATARLYPAANT
PQAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLLELHGGEVPQNREALEALPGVGRK
TANVVLNTAFGQLAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKLKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgccaaacgcctggagatctttcgcaggctgcacgaagacaacccggaaccc
aagaccgaactcgcctacaccacgccgttcgaattgctgatcgccgttattctctcggcc
caggccaccgacgtgggcgtgaacaaggcaaccgcgcgcctgtacccggccgccaacacg
ccacaggccatccatgccttgggcgtggaagggctgagcgaatacatcaagaccatcggg
ctgtacaacagcaaggccaagaacgtcatcgagacctgccggctgctcctcgaactgcac
ggtggcgaggtgccgcagaaccgcgaagccctggaagccttgccgggcgtgggccgcaaa
accgccaacgtggtgctgaacacggcattcgggcaactggccatggcggtcgacacgcat
atcttccgggtcagcaaccgcaccggcatcgcccccggcaagaccgtgctggaggtagaa
aagaagctgctcaagtttgtccccaaggactacctgctcgacgcccatcactggctgatc
ctgcatggccgttatgtttgccaggcgcgcaagccgcgctgcggcagttgccgcatcgaa
gatttgtgcgagtacaagctcaagacttccgacgattga
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