Pseudomonas synxantha LBUM223: VO64_0615
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Entry
VO64_0615 CDS
T03769
Name
(GenBank) NAD-specific glutamate dehydrogenase, large form
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00220
Arginine biosynthesis
pfb00250
Alanine, aspartate and glutamate metabolism
pfb00430
Taurine and hypotaurine metabolism
pfb00910
Nitrogen metabolism
pfb01100
Metabolic pathways
pfb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VO64_0615
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VO64_0615
00220 Arginine biosynthesis
VO64_0615
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
VO64_0615
Enzymes [BR:
pfb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
VO64_0615
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AKA81161
UniProt:
A0AAU8TKS1
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All DBs
Position
complement(699677..704536)
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AA seq
1619 aa
AA seq
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MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFDHTQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGSKGELLEVLPKGTQGDGILQESLMYLEIDRCANAAELNVLSKELEQ
VLGEVRVAVADFEPMKAKVQDLLAGIDASPFAIDGEEKAEIKNFLEWLVGNHFTFLGYEE
FVVRDEADGGHIEYDASSFLGLTKLLRAGLTAEDLRIEDYAVAYLREPTVLSFAKAAHPS
RVHRPAYPDYVSIREISADGKVIKEHRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGF
QAKAHLGKELAQVVEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDID
PLQLEKEVVQACRSWQDDYASLVVESFGEAHGTNVLADFPKGFPAGYRERFAAHSAVVDM
QHLNSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHANGREFWIHDFAFIAAEGVNLDIQQLNDTLQDAFVHIVHGDAENDAFNRLVLTA
GLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTAD
DLEDKQQRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFK
FNPHAIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPP
ANVVRHDSDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPNPATSFVERKRLFELPRSSWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQAD
KLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRN
QLLASMTDEVGHLVLGNNYKQTQALSLAARRAYERAAEYKRLMSDLEGRGKLDRAIEYLP
TEEQLSERASTGKGLTRPELSVLISYSKIDLKEALLKSQVPDDEYLTRDMETAFPPSLVA
KFGEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHL
PHWFRQIEALDHQVSADVQLELMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPHLAA
LGLKLDELLEGPTREGWQTRYQAYTEAGVPELLARMVAGTTHLYTLLPIIEAADVTGHDA
AEVAKAYFAVGSALDLPWYLQQISDLPVANNWQAQAREAFRDDVDWQQRAITISVLQMAD
APQDMEARVALWLEQHQDMADRWRAMMVEIRAAVGTDYAMYAVANRELLDLALSGQSVL
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaaggccgacttccagcaccaactgcaagcggcactg
gcccagcacatcagtgaacaggcactgccacaagtggcgctgtttgctgagcaattcttc
ggcatcatttccctggatgaactgacccagcgtcgcctttccgacctggccggttgcact
ctgtctgcctggcgcctgcttgagcgctttgatcacacccagccccaagtgcgggtctac
aaccccgattacgaacgtcatggctggcaatcgacccacactgcggtcgaagtgctgcac
catgacctgccttttttggtggactcggtgcgcaccgagctgaaccgccgcggctacagt
atccacaccctgcaaaccaccgtgctcagcgtgcgtcgtggcagcaagggcgagctcctg
gaagtcctgccaaaaggcacccagggcgacggcatcctgcaagaatcgctgatgtacctg
gaaatcgaccgttgcgccaacgccgccgaattgaacgtgctgagcaaagagcttgagcag
gtgctgggcgaagtgcgcgtggcagttgccgatttcgagccgatgaaagccaaggtccag
gacctgctggctggtatcgatgccagcccatttgccatcgacggcgaagaaaaagccgag
atcaagaacttcctcgaatggctggtgggcaaccacttcaccttcctcggctacgaagag
ttcgtggtacgtgacgaggcggacggcggtcatatcgaatatgacgccagttccttcctc
ggtctgaccaaactgctgcgcgccggcctcaccgccgaagacctgcgcatcgaagattac
gccgtggcctacctgcgcgaaccgaccgtgctgtcgttcgccaaggctgcacacccaagc
cgcgtgcaccgcccggcttacccggactatgtgtcgatccgtgaaatcagcgccgacggc
aaggtcatcaaggaacaccgcttcatgggcctgtacacctcctcggtgtatggcgaaagc
gtgcgggtgattccttacatccgccgcaaggtcgcggagatcgaacgtcgttcgggcttc
caggccaaggcgcacctgggcaaggagctggcccaggtggttgaagtgctgccccgcgac
gacctgttccagacaccggtcgacgagctgttcagcaccgtgatgtcaatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaggacccgtacggtcgtttctgctac
tgcctggcctacgtgccgcgtgacatctattccaccgaagtgcgccagaagatccagcaa
gtgctgatggatcgcctcaaggcctcggactgcgagttctggaccttcttctccgagtcc
gtactggcccgtgtgcaactgatcctgcgggtcgacccgaagaaccgcctggacatcgac
ccgctgcaactggaaaaagaagtggtgcaggcttgccgcagttggcaggacgactacgcc
agcctggtggtggaaagcttcggtgaagcccacggcaccaacgtgctggcggacttcccg
aaaggcttcccggccggctaccgcgagcgtttcgccgcgcattcggccgtggtcgacatg
cagcatctcaacagcctcaccgaagccaacccgctggtgatgagcttctatcagcccctg
ggccaggtctccggccagcgtgagctgcattgcaagctttaccacgccgataccccgctg
gcactgtccgacgtgttgccgatcctggaaaacctcggcctgcgtgtgctgggcgagttc
ccgtatcgcctgcgccatgccaatggccgtgaattctggatccatgactttgcattcatc
gccgccgaaggcgtgaacctggatatccagcagctcaacgacaccctgcaggacgcgttc
gtgcatatcgtccacggtgatgccgagaacgatgcgttcaaccgcctggtgctgaccgcc
ggcctgccatggcgcgacgtcgcgttgctgcgtgcttatgctcgctacctcaagcagatc
cgcctgggcttcgacctgggctatatcgccagcaccctgaacaaccacaccgacatcgcc
cgcgagttgacaaggttgttcaagacccgcttctacctggcacgcaagctcactgccgac
gacctggaagacaagcagcagcgcctggaacaagcgatcctcaccgccctggacgacgtt
caggtgctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggccacgctg
cgtaccaacttctaccagaccgacgccaacggccagaacaagtcgtacttcagcttcaag
ttcaatccgcatgcgattcctgagctgcctaagccggtaccgaagttcgaaatcttcgtg
tactcgccgcgtgtcgaaggtgtgcacctgcgctttggcaatgtcgcccgtggcggcctg
cgctggtccgaccgtgaagaagacttccgtaccgaagtattgggcctggtaaaagctcag
caggtgaagaactcggtgatcgtgccggtgggtgccaagggcggtttcctgccgcgtcgc
ctgccattgggtggcagccgtgacgagatcgcggccgagggtatcgcctgctaccgcatc
ttcatttccggcctgctggacattaccgacaacttgaaggatggcgccctggtgccgccg
gccaacgtcgtgcgtcatgacagcgatgacccttacctggtggtggcggcggacaagggc
actgcgaccttctccgacatcgccaacggcattgccatcgactacggcttctggctgggc
gacgcatttgcctccggcggttcggccggttacgaccacaagaaaatgggcatcaccgcc
aagggcgcgtgggtcggtgtgcagcgtcacttccgtgagcgcggcatcaacgtgcaggaa
gacagcatcactgtggtgggcgtcggcgatatggccggtgacgtgttcggtaacggcttg
ctgatgtccgacaagctgcaactggtcgcagccttcaaccacctgcatatcttcatcgac
ccgaaccctaacccggccaccagcttcgtcgagcgcaagcgtttgttcgagctgccgcgt
tcgtcgtggaccgactacgacaccagcatcatgtccgaaggcggcggtatcttctcgcgc
agcgccaagagcatcgccatctcgccacagatgaaggaacgcttcgacatccaggccgac
aagctgactccgaccgaactgctcaacgccttgctcaaggcaccagtggatttgttgtgg
aacggcggcatcggtacctacgtcaaggccagcaccgagagtcatgccgatgtgggcgac
aaggccaacgacgcgctgcgtgtcaacggcaacgagctgcgctgcaaggtggtgggtgag
ggcggtaacctcggcatgacccaactgggccgtgtggaattcggcctcaatggcggcggt
tccaacaccgactttatcgacaacgccggtggcgtggactgctccgaccacgaagtgaac
atcaagatcctgctcaacgaagtggtgcaggccggtgacatgaccgacaagcaacgcaac
cagttgctggcgagcatgaccgacgaagtcggccacctggtgttgggcaacaactacaag
cagacccaggccctgtccctggcggcgcgccgtgcctacgagcgtgccgccgagtacaaa
cgcctgatgagcgatctggaaggtcgtggcaagctggaccgtgccatcgagtacctgccg
accgaggaacagctcagcgagcgcgcttctaccggcaagggcctgactcgtccggagttg
tcggtgctgatctcgtacagcaagatcgacctcaaggaggcgctgctcaagtcgcaggtg
ccggatgacgagtacctgacccgtgacatggagaccgcgttcccgccgagcctggtggcc
aagttcggtgaggccatgcgtcgtcaccgcctcaagcgcgagatcgtcagcacccagatc
gccaacgacctggtcaaccacatgggcatcaccttcgtgcagcgcctcaaggagtcgact
ggcatgagcccggcgaacgtggccggcgcctatgtgatcgtgcgcgacatcttccacctt
ccgcactggttccgccagatcgaagccctggaccaccaggtctctgccgacgtgcaactg
gagctgatggatgagctgatgcgcctgggtcgtcgcgctacgcgctggttcctgcgcagc
cgtcgcaacgagcaggacgccgggcgtgacaccgcgcacttcggtccgcacttggccgcg
ttgggtctcaagctcgacgagttgctggaaggtccgacccgcgaaggttggcagacccgc
taccaggcgtacaccgaagccggtgtgccggagttgctggcgcgcatggtggccggtaca
acccacctgtacaccttgctgccgatcatcgaagccgccgacgtgaccgggcatgacgcc
gccgaagtggccaaggcctacttcgccgtcggcagcgccctggacctgccgtggtacctg
cagcagatcagcgatctgccggtagccaacaactggcaggcccaggcccgcgaagccttc
cgcgacgacgtggactggcagcaacgggcgatcactatctcggtcctgcaaatggccgac
gcgccacaagacatggaagcccgcgtggccctgtggcttgagcagcaccaggacatggct
gatcgctggcgcgcgatgatggtggaaattcgtgctgctgttggcacggactacgccatg
tacgcagtggccaaccgggagttgctggacctggcgttgagtggtcagtcggtgctgtaa
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