Pseudomonas synxantha LBUM223: VO64_4021
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Entry
VO64_4021 CDS
T03769
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb00300
Lysine biosynthesis
pfb00550
Peptidoglycan biosynthesis
pfb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VO64_4021
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VO64_4021
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
VO64_4021
Enzymes [BR:
pfb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VO64_4021
Peptidoglycan biosynthesis and degradation proteins [BR:
pfb01011
]
Precursor biosynthesis
Amino acid ligase
VO64_4021
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AKA84567
UniProt:
A0AAU8U1C5
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All DBs
Position
4519750..4521213
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELSLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGTLQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWNDLKCRVVNLDDAFGRQ
LAGEDSEARLISYSLQDSSAYLFCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNL
LAAIGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLEAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVVVTDDNPRSEDPSQIFDDIRVGF
KDVAKATFVAGRGAAIARLIASAGVDDVVVLAGKGHEDYQEINGERHAFSDLVEADRALT
AWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagcctgaacaagatttttgcccatgccggccgcgatctgctgattcgcgag
ttgagcctggacagccgtaatgtacgcgccggtgacctgttcctggcggtgcccggcggc
aagttcgacggccgtgcgcatatcgccgacgccctgcaacgcggtgcggccgccgtggcc
tatgaagtggaaggcgccaccgtgctgccgatcaccgatgtgccgttgattccggtcaag
ggcctggctgcgcagctttccgatattgccgggcgtttctacggtgacccgagccgccac
ctcaacctagtgggtgtgaccggcaccaatggcaagaccagcgtgacccaattggtcgcc
caggcccttgacctgttgggccaacactgcggcattgtcggcaccctgggcacgggcttt
tatggcacgctgcaaagcggcctgcacaccaccccgaatccgattgccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggccgttgccatggaagtttcttcacacggc
ctggaccagggtcgagttaccgccctggcctttgacgttgcggtgatgaccaacctgtcc
cgcgaccacctcgattaccacggcaccatggaggcgtacgccgctgccaaggccaagctg
tttgcctggaatgacttgaaatgccgggtggtcaacctcgacgacgcattcggccgtcaa
ctggctggcgaagacagcgaagcgcgcctgatcagctatagcctgcaggactccagcgca
tatctgttttgccgtgaagcccaattcaatgacgaaggcgtgcgcgccaccttggtcacg
ccccagggcgagcaccatttgcgcagcaccctgctcgggcgtttcaacctgagcaacctg
ctcgccgccatcggcgcgttgctgggcctggattacgccctggatgaaatcctgcgcgtg
ctgccgaagctggaaggcccggctggccgcatgcagcgcctgggcggcggcacgcagcca
ttggtggtggtcgattacgcccacaccccggacgccttggaaaaagtcctcgaagccttg
cgcccgcacgccaagggcaaattgctctgcctgttcgggtgcggcggtgatcgtgaccgc
ggcaagcgtccattgatggccgagatcgtcgagcgtctggccgatggcgtagtcgtcacc
gacgataacccgcgcagcgaagacccgagccagattttcgacgacatccgtgtcggcttc
aaagatgtcgccaaggccacttttgttgccggccgcggcgccgccattgcccggttgatt
gccagcgctggtgttgacgacgtggttgtccttgcgggcaaaggccacgaggactatcag
gaaatcaacggcgaacgccatgccttctccgatctggtcgaggccgatcgcgccctgacc
gcctgggaggccgcccatgcttaa
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