Pseudomonas ogarae F113: PSF113_3578
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Entry
PSF113_3578 CDS
T01734
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00290
Valine, leucine and isoleucine biosynthesis
pfe00660
C5-Branched dibasic acid metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
pfe01210
2-Oxocarboxylic acid metabolism
pfe01230
Biosynthesis of amino acids
Module
pfe_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
PSF113_3578
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PSF113_3578
Enzymes [BR:
pfe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PSF113_3578
4.2.1.35 (R)-2-methylmalate dehydratase
PSF113_3578
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Gene cluster
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Motif
Pfam:
Aconitase_C
DUF3666
Motif
Other DBs
NCBI-ProteinID:
AEV63578
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All DBs
Position
4208736..4209344
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AA seq
202 aa
AA seq
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MQPFEIVTGKAAPLLASNIDTDVIMPKQFLKGIDRSGLDKGVFFDLRFLESGETNPDFIL
NQPAWSGASFLVTGPNFGCGSSREHAVWGLKQLGIRALIGTSFAGIFYDNCQRNGVLAIQ
LCEAQLQRLVRVVNNGATATISVDLPNQKIWLSEGSVIEFTIDALRKQSLLSGLDTIGAT
LQRAAQIRDFEARHYAENPWLN
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttttgagatcgtgaccgggaaagccgctcctttgctcgcgtccaacatcgat
actgacgtcatcatgcccaagcagttcttgaaggggatcgatcgaagcggtttggataaa
ggggtgttcttcgacctgcgtttccttgaatctggtgagacaaatccagacttcatcctc
aatcaaccggcgtggagcggggccagtttcctggtgaccggccccaactttggttgtggt
tccagtcgcgagcatgcggtatgggggctcaagcagctggggattcgtgcactgatcggg
accagctttgccggcatcttctatgacaattgtcagcgtaacggcgtgctcgcgatacag
ctttgcgaagcgcagctacagagattggttcgcgtcgtgaacaatggggccaccgcgacg
atcagcgtcgatctgccgaaccagaagatttggctaagcgaggggtcggtcatcgagttc
acaatcgatgcgttgcgcaagcaatcgttgttgtcggggttggacactatcggcgctacc
ttgcagcgggcggcgcagattcgtgatttcgaagcgcgtcactacgcagaaaatccgtgg
ctgaactga
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