KEGG   Pseudomonas ogarae F113: PSF113_3681
Entry
PSF113_3681       CDS       T01734                                 
Symbol
gdhB
Name
(GenBank) GdhB
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
pfe  Pseudomonas ogarae F113
Pathway
pfe00220  Arginine biosynthesis
pfe00250  Alanine, aspartate and glutamate metabolism
pfe00430  Taurine and hypotaurine metabolism
pfe00910  Nitrogen metabolism
pfe01100  Metabolic pathways
pfe01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    PSF113_3681 (gdhB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PSF113_3681 (gdhB)
   00220 Arginine biosynthesis
    PSF113_3681 (gdhB)
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    PSF113_3681 (gdhB)
Enzymes [BR:pfe01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     PSF113_3681 (gdhB)
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_ACT1 GDH_ACT2 GDH_HM3 GDH_ACT3 GDH_HM1 GDH_HM2 ELFV_dehydrog TCAD2
Other DBs
NCBI-ProteinID: AEV63682
LinkDB
Position
4348752..4353620
AA seq 1622 aa
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRLLERFDHTQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGSKGELLEILPKGTQGDDILQESLMYLEIDRCANAAELNVLSKELEQ
VLGEVRVAVADFEPMKAKVQEILDSLDSSAYAIDADEKSEIKSFLEWLVGNHFTFLGYEE
FVVRDEADGGHIEYNPDSFLGLTKLLRAGLTAEDLRIEDYAVNYLREPTPLSFAKAAHPS
RVHRPAYPDYVSIREIDADGKVIKECRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGF
QAKAHLGKELAQVVEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPRDIYSTEVRQKIQQVLMDRLKASDCEFWTFFSESVLARVQLILRVDPKNRLDID
PVLLEKEVVQACRSWKDDYASLVVESFGEAQGTNVLSDFPKGFPAGYRERFAAHSAVVDM
QHLLSLSEKNPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEF
PYRLRHTNGREFWIHDFAFTAAEGLDLDIQQLNDTLQDAFVHIVRGDAENDAFNRLVLTA
GLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTGD
DLEDKQLRLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFK
FNPHLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDYRTEVLGLVKAQ
QVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPP
ANVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITA
KGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFID
PNPEPASSFAERKRLFDLPRSAWSDYDASIMSEGGGIFSRSAKSIAISPQMKERFDIKAD
KLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGE
GGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRN
QLLASMTDEVGGLVLGNNYKQTQALSLAARRAFVRIAEYKRLMNDLEGRGKLDRAIEFLP
SEEAINERVAAGHGLTRAELSVLISYSKIDLKEALLNSLVPDDDYLTRDMETAFPPTLVN
QFSEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHL
PHWFRQIEALDHQVSADVQLELMDELMRLGRRATRWFLRSRRNEQNAARDVAHFGPHLAA
LGLKLDELLEGPTREGWQTRYQAYVAAGVPELLARMVAGTTHLYTLLPIIEASDVTGQNA
ADVAKAYFAVGSALDITWYLQQISALPVENNWQALAREAFRDDVDWQQRAITISVLQEGD
GDQDVETRLALWLEQHHEMVERWRAMLVDIRAASGTDYAMYAVANRELLDVAMSGQAVVT
AN
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggcgttcttcaccgcagccagcaaagccgacttccagcaccaactgcaggcggcactg
gcgcagcacatcagtgaacaggcactgccacaagtggcgctgttcgctgaacaattcttc
ggcatcatttccctcgatgaacttacccaacgccggttgtccgaccttgccggctgcacc
ctgtctgcctggcgcctgcttgagcgcttcgatcacacgcaaccgcaggtgcgcgtctac
aaccccgattacgaacgccacggctggcagtcgacccacacggccgtggaagtgctgcac
cacgacctgccgttcctggtggattcggtccgtaccgagctgaaccgtcgcggctacagc
atccataccctgcaaaccaccgtgctgagcgtgcgtcgcggcagcaagggcgagttgctg
gaaatcctgccaaaaggcacccagggcgacgacatcctgcaagagtcgttgatgtacctg
gagatcgaccgctgcgccaacgccgccgaactcaatgtcctgagcaaggaacttgagcaa
gtgctgggcgaagtgcgcgtggccgtggctgacttcgaaccgatgaaagccaaggtccag
gaaatcctcgacagcctggacagcagcgcctacgccatcgacgctgatgaaaagagcgag
atcaagagcttcctggaatggctggtgggtaaccacttcaccttcctgggctacgaagaa
ttcgtggtgcgcgatgaggccgatggcggccacatcgaatacaaccctgattcgttcctg
ggcctgaccaaattgctgcgcgccggcctgaccgccgaagacctgcgcatcgaagactac
gccgtcaattacctgcgcgaaccgacgccgctgtcgttcgccaaggccgcgcacccgagc
cgcgtacaccgtccggcctacccggactacgtgtcgatccgtgaaatcgacgccgacggc
aaggtgatcaaggaatgccgcttcatgggcctgtacacctcttcggtgtatggcgagagc
gtgcgggtcatcccgtacatccgccgcaaggtcgcggaaatcgagcgtcgctcgggcttc
caggccaaggcgcacctgggcaaggaactggcccaggtggtcgaagtgctgccccgtgac
gacttgttccagaccccggtggacgagctgttcagcaccgtcatgtccatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaagacccgtatggccgtttctgctac
tgcctggcctacgtgccacgggacatctattccaccgaagtgcgccagaagatccagcag
gtgctgatggatcgcctgaaggcctcggactgcgaattctggaccttcttctccgaatcc
gtgttggcccgcgtgcagttgatcctgcgagtggacccgaagaaccgtctcgacatcgat
ccggtcctgctggaaaaagaagtcgtgcaggcctgccgcagctggaaagacgactacgcc
agcctggtggtcgaaagcttcggcgaagcccagggcaccaatgtgctgtcggatttcccg
aaaggcttcccggccggctaccgcgagcgctttgccgcgcactcggccgtggtcgacatg
cagcacctgctgagcctgagcgaaaagaacccgctggtcatgagcttctaccagccgctg
ggccaggtctccggccagcgtgagctgcactgcaagctgtatcacgccgacacgccgctg
gcgttgtccgacgtgctgccgatcctggaaaacctcggcctgcgcgtgctgggcgagttc
ccgtaccgcctgcgccacaccaacggccgcgagttctggattcatgatttcgcgttcacc
gccgccgaaggcctggacctggacatccagcaactcaacgacaccttgcaggacgccttc
gtccacatcgtgcgtggcgatgccgagaacgatgcgttcaaccgcctggtgctgaccgcc
ggcctgccatggcgcgacgtggcgctgctgcgtgcctatgcccgttacctgaagcagatc
cgcctgggcttcgacctgggttacatcgccagcaccctgaacaaccacaccgacatcgct
cgcgagctgacccggttgttcaagacccgcttctacctggcgcgcaaactcactggcgat
gacctggaagacaagcagctgcgcctggagcaagcgattctctcggccctggacgacgtc
caggtgctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggccaccctg
cggaccaacttctaccagaccgacgccaacggccagaacaagtcctacttcagcttcaag
ttcaacccgcacctgatcccggaactgccgaaaccggtgcccaagttcgagatcttcgtc
tactcgccacgggtcgaaggcgtgcacctgcgcttcggcaacgttgcccgtggcggcctg
cgctggtccgaccgtgaagaagactaccgcaccgaagtgcttggcctggtaaaagcccag
caagtgaagaactcggtgatcgtgccggtgggcgccaagggtggtttcctgccacgtcgc
ctgccgttgggcggcagccgggacgagatcgcggccgagggcatcgcctgctaccgcatc
ttcatctcgggcctgttggacatcaccgacaacctgaaggacggcgcgttggtaccgccg
gccaacgtcgtgcgtcatgacgacgatgacccgtacctggtggtggcggcggacaagggc
actgcgaccttctccgacatcgccaacggcatcgccatcgactatggcttctggctgggc
gatgcgttcgcctccggcggttcggctggttacgaccacaagaaaatgggcatcaccgcc
aagggcgcgtgggtcggcgtgcagcgccacttccgcgagcgcggcatcaatgtccaggaa
gacagcatcaccgtggtgggcgttggcgacatggccggcgacgtgttcggcaacggcttg
ttgatgtccgacaagctgcaactggtcgcggccttcaaccacctgcacatcttcatcgac
ccgaacccggagccggccagcagctttgccgagcgcaagcgcctgttcgacctgccgcgt
tcggcctggagcgactacgacgccagcatcatgtccgaaggcggcggtatcttctcgcgc
agcgcgaaaagcatcgccatctcgccacagatgaaagaacgcttcgacatcaaggccgac
aagctgaccccgaccgagctgctcaatgccttgctcaaggcaccggtggacctgttgtgg
aacggcggtatcggcacttacgtcaaggccagcactgaaagccacgccgatgtcggcgac
aaggccaacgatgcactgcgcgtgaacggcaacgaactgcgctgcaaggtcgtgggcgag
ggcggcaacctgggcatgacccaactgggtcgcgtcgagttcggcctcaatggcggcggt
tccaacaccgacttcatcgacaacgcgggcggcgtggactgctccgaccacgaagtgaac
atcaagatcctgctcaacgaagtggtgcaggccggcgacatgaccgacaagcaacgcaac
cagttgctggcgagcatgaccgacgaagtcggtggcctggtgttgggcaacaactacaag
cagacccaggccctgtccctggcggcgcgccgtgccttcgtgcggatcgccgaatacaag
cgtctgatgaacgatctggaaggccgcggcaagctggatcgcgccatcgagttcctgccg
tctgaagaggcgatcaacgagcgtgtcgcggcgggccatggcctgacccgtgccgaactg
tcggtgctgatctcctacagcaagatcgacctcaaggaagcgctgctcaactccctggta
ccggacgacgattacctgacccgtgacatggagacggctttcccgccgacgctggtgaac
cagttctccgaggccatgcgtcgccatcgcctcaagcgcgagatcgtcagcacccagatc
gccaacgacctggtcaaccacatgggcatcaccttcgttcagcggctcaaggagtctacg
ggcatgagcccggcgaacgttgcaggtgcgtatgtcattgttcgggatatcttccacctc
ccgcactggttccgtcagatcgaagccctggaccaccaggtctcggccgacgtgcaactg
gagctgatggacgagttgatgcgcctgggtcgtcgcgccacgcgctggttcctgcgcagc
cgccgcaacgagcagaacgctgcccgtgacgttgcgcacttcggtccgcacctggccgcg
ttgggcctcaagctcgacgaactgctggaaggtccgacccgcgaaggctggcagacccgc
taccaggcctacgtggccgccggcgtgccagagttgctggcgcgcatggttgccggcacc
acgcacctgtacaccttgttgccgatcatcgaggcgtccgacgtcactggccagaacgct
gctgatgtggccaaggcctacttcgccgtgggcagcgccctggacatcacctggtacctg
caacagatcagcgcactgccggtggaaaacaactggcaggcactggcccgtgaagcgttc
cgcgatgatgtcgactggcaacagcgggcgatcaccatctcggtcctgcaagagggcgat
ggcgaccaggacgtggaaacccgcctggcactgtggctggagcagcaccacgaaatggtc
gagcgctggcgcgccatgctggtggacatccgtgccgccagcggtaccgactacgccatg
tacgcagtcgccaaccgcgagctgctggatgtggcgatgagcggtcaggcggtcgtgacg
gccaactga

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