Pseudomonas ogarae F113: PSF113_4026 Help Entry PSF113_4026       CDS       T01734                                  Name (GenBank) nad-dependent dna ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pfe  Pseudomonas ogarae F113 Pathway pfe03030   DNA replication pfe03410   Base excision repair pfe03420   Nucleotide excision repair pfe03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pfe00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PSF113_4026    03410 Base excision repair     PSF113_4026    03420 Nucleotide excision repair     PSF113_4026    03430 Mismatch repair     PSF113_4026  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pfe03032]     PSF113_4026    03400 DNA repair and recombination proteins [BR:pfe03400]     PSF113_4026 Enzymes [BR:pfe01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PSF113_4026 DNA replication proteins [BR:pfe03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PSF113_4026 DNA repair and recombination proteins [BR:pfe03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PSF113_4026    NER (nucleotide excision repair)     GGR (global genome repair) factors      PSF113_4026    MMR (mismatch excision repair)     DNA ligase      PSF113_4026   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PSF113_4026 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AEV64023 LinkDB All DBs Position complement(4741364..4743721) Genome browser AA seq 785 aa AA seqDB search MNAVETRIQKLRTELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEEQHPELVTSDSPTQ RVGSVALSAFSQVRHEIPMLSLGNAFDETTMREFDRRVTEGLDLPMGDLLGGGAAVEYSC EPKLDGLAVSLLYQDGMLVRGATRGDGTTGEDISVNVRTVRNIPLKLQGSGWPPVLEVRG EVYMSKAGFERLNATQLEAGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGIGQVTA DIADTHIGNLKQLKAWGLPISRELKLAHGIDECLDYYRDIGERRNALPYEIDGVVFKVNS IASQRELGFRAREPRWAIAHKFPASEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTV ANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVITERRPDDARPVEIPQQCPVCGS HVERTQLIKRSKGRETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGEKSVEQ LVDEGLVGSPADLYALTFEQVVDLEGFAELSSRNLLAAIVDSKKPSLARFIYALGIPDVG EETAKVLARSLGSLERVQAALPQVLTYLPDVGLEVAHEIHSFFEDPHNCQVIKDLLRHGL EIQDQGELGAEFSASTTLGGFLDKLNIPSVGPGGAQKLADKFGSLEAVMSADWLDMRQAL PEKQANAVREFFAIAANRQQAEAAEQQLHDFGMHWQSEKKVVEGLPEAGHTWVLTGSLEL MSRDVAKDKLESLGAKVAGSVSAKTHCVVAGPGAGSKLTKANELGLKVLDEEAFVIFLSQ HGITV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgaacgccgttgaaacccgcatccaaaagctgcgcaccgagctggatcagcacaactac cgctatcacgtcctcgatgagccaagcatcccggacgccgagtacgatcgcttgttccac gagctcaaggccctggaagagcaacacccggaactggtaaccagtgattccccgacccag cgggtcggcagcgtggcactgtcggcgttcagccaggtgcgccacgagatcccgatgctc agcctcggcaacgccttcgacgaaaccaccatgcgtgaattcgaccgccgggtgaccgaa ggcctcgacctgcccatgggcgatttgctgggcggtggcgcggcggtggaatacagctgc gagccgaagctcgatggcctggcggtcagcctgttgtatcaggacggcatgctggtgcgc ggagccacgcgcggtgacggcaccacgggcgaggacatcagcgtcaacgtgcgtaccgtg cgcaacatccccctcaagttgcagggcagtggctggccgccagtgttggaagtgcgcggc gaggtgtacatgtccaaggccggcttcgagcgcctcaacgctacgcaactggaagcgggt ggcaagaccttcgccaatccgcgcaacgccgcggcggggagcctgcgccagctggattcc aagatcaccgccaaccgtccgctggaattctgctgctacggtatcggtcaggtgaccgcg gacattgccgatacccacatcggcaacctcaaacagctcaaggcctggggcttgcctatc agtcgtgaactgaagctggcccacggtattgacgaatgcctggattactaccgcgacatc ggcgagcggcgcaacgcgttgccttatgaaatcgacggggtggtgttcaaggtcaacagc atcgcctcccagcgcgagctcggtttccgcgcccgggagccacgctgggccatcgcccat aaattcccggcctctgaagaactcactgagttgctggacgtcgagttccaggtcggtcgc accggtgctgtcacgcccgtggcgcgcctcaagccggtcaaggtcgctggcgtgaccgtg gccaacgccaccttgcacaacatggacgaagtggcgcgcctgggcctgatgatcggcgac accgtgatcatccgccgtgccggtgacgtgatcccgcaagtggtgcaagtgatcaccgag cgccgcccggacgatgcccgccccgtggagatcccccagcagtgcccggtgtgtggttcc catgtcgagcgcacgcaactgatcaagcgcagcaagggccgtgaaaccatcagcgaaggc gcggtgtaccgctgcgtcggtcgcctggcctgtggtgcgcagctcaagcaggccatcatt cacttcgtctcgcgtcgggccatggacatcgagggcctgggcgagaagagcgtcgagcaa ctggtggatgagggcctggtggggtcgcccgccgatctgtatgccctgaccttcgagcag gtggtcgacctggaaggcttcgccgaactgtcgagcaggaacttgctggcggctatcgtc gacagcaaaaaaccgagcctggcgcgtttcatctacgccctcggtatcccggatgtgggc gaggagaccgccaaggtcctggctcgttctcttggttcgctggagcgcgtgcaggcggcc ttgccccaggtgctcacctacttgcccgacgtcggcctggaagtcgcccacgagatccac agcttcttcgaagacccacacaactgccaggtgatcaaggacctgctgcgccacggtctc gagatccaggaccaaggcgagttgggcgccgagttctccgccagcaccaccctgggtggc tttctcgacaagctgaacatcccttcggtcggcccaggcggggcgcagaaactggcggac aagttcggctcactcgaggcggtgatgagcgccgactggctggacatgcgccaggcgttg ccggaaaaacaggccaacgctgtgcgcgagttcttcgccattgccgccaaccgtcagcag gccgaagcagcggagcaacagctgcacgactttggcatgcattggcagagcgagaaaaag gtcgtcgaaggcttgcccgaggcggggcacacctgggtgctgaccggttcgctggagttg atgagccgcgatgtcgccaaggacaaactggagagcctgggggccaaggtcgccggttcc gtgtcggcgaaaacccactgcgtggtggcggggccgggcgccggttcgaaactgaccaag gccaatgagctggggctcaaggtgctcgatgaagaggcgtttgtcatctttctgagtcag catggcatcacggtttag

DBGET integrated database retrieval system