Pseudomonas ogarae F113: PSF113_4788
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Entry
PSF113_4788 CDS
T01734
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pfe
Pseudomonas ogarae F113
Pathway
pfe00300
Lysine biosynthesis
pfe00550
Peptidoglycan biosynthesis
pfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSF113_4788
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSF113_4788
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
PSF113_4788
Enzymes [BR:
pfe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PSF113_4788
Peptidoglycan biosynthesis and degradation proteins [BR:
pfe01011
]
Precursor biosynthesis
Amino acid ligase
PSF113_4788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PipB2_N
Motif
Other DBs
NCBI-ProteinID:
AEV64777
UniProt:
A0ABN5GH44
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All DBs
Position
complement(5575951..5577414)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGHDLLIRELALDSRNVRAGDLFLAVPGARFDGRDHIADALKRGAAAVA
YEVHGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGNGFHGALESGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVLTNLSRDHLDYHGTMQAYGEAKARLFAWNDLKCRVINLDDEFGRQ
LAAEKRESRLITYSLEDASAYLYVRQAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPQRIFDDIRAGF
TAVDNVTFVAGRGQAIAQLIASASADDVIVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttgcccacgccggtcacgatctgttgatccgcgaa
ctggccctggacagccgcaatgtacgtgccggggacttgttcctggcggtgccgggtgcg
cgtttcgatggtcgcgaccatatcgccgacgccctgaagcgtggcgcggctgccgtggcg
tatgaagtgcacggcgcgaccgtgctgccgatcaccgacgttccgctgattccggtcaag
ggcctggcggcgcagctgtcggacatcgccgggcgtttttatggcgacccgagccgccat
ctgaacctggtgggcgtgaccggcaccaacggcaagaccagcgtgacccaactggtggcc
caggccctggacctgctcggccagcattgcggcattgtcggcaccttgggcaacggcttc
catggcgcactggaaagtggcctgcacaccacgccgaacccgattgccgtgcaagcgacc
ttggcggacctgaaaaaggccggtgccaaggccgttgcgatggaagtctcttcccacggt
ttggaccaggggcgtgtgaccgccctggcgttcgatgtcgcggtgttgaccaacctgtcc
cgggatcatctggattaccacggcaccatgcaggcctatggtgaagccaaggccaggctg
tttgcctggaatgacctgaagtgccgggtcatcaacctcgatgacgaattcggtcggcaa
ctggctgccgaaaagcgtgagtcgcggttgatcacctacagcctggaagatgccagcgcc
tacctttatgtacgccaggcgcaattcaatgacgaaggcgtgcgcgccacactggtcacg
cctcagggcgaacaccatttgcgcagcaccttgctcggccgtttcaacctgagcaacgta
ttggcggccatcggcgccttgctcggcctggactacgcactggacgaaattctcaaggtc
ttgccgaagctcgagggcccggccggtcgcatgcagcgtttgggcggtgggactcaacca
ctggttgtggtcgattacgcccatacccccgacgcgttggaaaaagttctcacggccctg
cgtcctcacgccaagggcaggttgctgtgcctgttcggctgcggtggcgatcgtgatcgc
ggcaaacgcccattgatggccgaagtcgtggagcggctggcagacggcgtgctggtcacc
gacgacaaccctcgtaccgaagacccgcagcggattttcgacgacatccgcgccggtttt
acggctgtggacaacgtcaccttcgttgccggtcgcggccaggccattgcccagttgatc
gccagcgcctcggcggacgatgtcatcgtcctggccggcaagggccacgaggactatcag
gaaatcaacggcgaacgccatgctttctccgatctggtggaagccgatcacgccctgacc
gcgtgggaggtggcccatgcttaa
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