Paludibaculum fermentans: IRI77_05575
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Entry
IRI77_05575 CDS
T06895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pfer
Paludibaculum fermentans
Pathway
pfer01501
beta-Lactam resistance
pfer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_05575
01503 Cationic antimicrobial peptide (CAMP) resistance
IRI77_05575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfer03036
]
IRI77_05575
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_05575
01504 Antimicrobial resistance genes [BR:
pfer01504
]
IRI77_05575
Chromosome and associated proteins [BR:
pfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IRI77_05575
Transporters [BR:
pfer02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IRI77_05575
Antimicrobial resistance genes [BR:
pfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IRI77_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
CzcB_C
Biotin_lipoyl
BSH_RND
RND-MFP_C
HH_MFP_RND
HH_CzcB
HH_YBHG
BSH_YknX
Beta-barrel_AAEA
BSH_Fcp1
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
QOY89425
UniProt:
A0A7S7SMV1
LinkDB
All DBs
Position
complement(1399942..1401102)
Genome browser
AA seq
386 aa
AA seq
DB search
MFCSNPTKLAALGLAALWLTGCGGDKPAAKKADDTPAVKVSVIRTAQEAMPDEYVATGTV
KARTTSVLSARVMGYIRELKPQAGDTVKAGQVVAVIEAKEIETSVRQAEAAREEARGAIP
EVDNAIAAAKAQLDLAASTLGRMKSLFDQKSITPQEFDEVSARHRMAQANYEMAKAKRIQ
LDQKIKQAGEAVAQASVMRGYTEVTAPFNGIVIERKAEPGMLAAPGMPLLVVEQAGSYRL
EASVEEARLATIRPGLAVKVDLESMDHPLDARVEEIVPAMDPASRSFTVKIGLARAGTLR
SGMFGRARFAQGSKQALTIPVMALMEQGQVQRVFVVDNGIARGRLITTGARTEGRVEVLS
GLQPGEAVVSPAPTNLADGGKVEVRP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcagtaacccgaccaagctggcggccctcggtctggccgccctgtggctcacc
ggctgcggtggagacaaaccggccgcgaagaaggccgatgataccccggccgtcaaggtg
agcgtcatccgtaccgcccaggaggccatgccggacgagtacgtggccaccggcaccgtg
aaagcccgcaccacctccgtcctctccgcccgcgtcatgggctacatccgcgaactcaag
ccgcaggccggagacaccgtcaaggccgggcaggtggtcgccgtcattgaggccaaggag
atcgaaaccagtgtccgccaggccgaggccgcccgcgaagaggcccgcggagccattccc
gaggtcgacaacgccatcgccgccgccaaggcccaactcgatctcgccgcctccaccctg
ggccgcatgaagagcctcttcgatcagaaatccatcacgccccaggagttcgacgaagtc
tccgcccgccaccgcatggcccaggccaactacgaaatggccaaggcgaaacgaatccag
ctcgaccagaagatcaagcaggccggggaggccgtcgcccaggcgtcggtcatgcgtggc
tacacggaggtgaccgcgcccttcaacggcatcgtcattgaacgcaaggccgagcccggc
atgctcgccgcgcccggcatgccgctgctggtcgtcgaacaggccggcagctaccgtctc
gaagcctcagtggaagaggcccgcctcgccacaatccgccccggcctcgccgtcaaagtg
gacctcgagtcgatggaccaccccctcgacgcccgcgtggaagagatcgtccccgccatg
gatcccgcctcccgctcgttcaccgtcaaaatcggactcgccagagccggcaccctccgc
agcggcatgttcggccgcgcccgcttcgcccagggctccaaacaagccctgacgatcccc
gtgatggccctcatggagcaaggccaggtccagcgcgtcttcgtcgtcgacaacggcatc
gcccgcggccgcctcatcaccaccggagcccgcaccgaaggccgcgtcgaagtcctcagc
ggcctccagcccggggaagccgtcgtctcccccgcccccacgaatctggccgacggcggc
aaggtcgaggtacgcccgtga
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