Paludibaculum fermentans: IRI77_17250
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Entry
IRI77_17250 CDS
T06895
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00300
Lysine biosynthesis
pfer00550
Peptidoglycan biosynthesis
pfer01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IRI77_17250
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IRI77_17250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
IRI77_17250
Enzymes [BR:
pfer01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IRI77_17250
Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
Precursor biosynthesis
Amino acid ligase
IRI77_17250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SRP54
Motif
Other DBs
NCBI-ProteinID:
QOY91621
UniProt:
A0A7S7NXI0
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All DBs
Position
4399576..4401072
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AA seq
498 aa
AA seq
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MKLSDLISGVPLGAALALEAYGLDVAGLEYDSRRVKPGYLFFAFPGAKADGRAFAAQALL
AGALGVVSELAKPDDFDGLWIQVQHGRAALAAMSRRFYGAPDESLALVGVTGTNGKTTTV
YCVDAMLRHAGRTTGMVGTILYRVAGEERPAVNTTPDSLDLMRLMDEVRRAGGTNFTFEV
SSHALALRRVAGLTFHTVLFTNLTRDHLDFHGTMEEYFAAKVLLFQGSGGPAPKFAVINA
DDSWGKQIPLQPETKRLTYGLKNNADVKAENIDAGFHGLRFDVRFPGGRQHIASKLCGLI
NVYNLLGAFAVGLSLGLTAQQIAEGLESCTAVPGRFERVDAGQPFLVVVDYAHTDDALRN
TIATARALNPKRVITLFGCGGDRDRAKRPLMGQAAAEMSDYVVVTSDNPRSEDPLSIIND
ALVGVRRFDTKHVVEPDREKAIRLAISEARPGDIVLLAGKGHETYQVLRDRTIDFDDRVA
ARRVLEGFGYVPKSEARA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatctgacctcatctctggtgttccgcttggcgccgccctcgcactcgaagcc
tacgggcttgacgttgccgggctggagtacgactcccgccgggtgaagcccggctacctc
ttcttcgcctttcccggcgccaaggcagacggccgtgcgttcgcagcgcaagcgctgctg
gcaggagcattgggggttgtttcggaactggcgaagccggacgatttcgacgggctctgg
atccaagtccaacacggccgagccgccctggcggcgatgagccggcgcttctatggcgct
ccggacgagagcctcgcgctggttggagtgacgggcacgaatggcaagacaacgacggtc
tactgcgttgatgccatgctgcgacacgcaggccggacaacaggaatggttgggaccatc
ctgtaccgggttgcaggggaagagcggcccgccgttaatacaacacctgattcgctcgat
ctgatgcgcctcatggacgaggtaagacgggccggcggcaccaacttcactttcgaggtt
tcgtcccacgcactggccctccggcgcgtcgccggcctgacattccacacggttctgttc
accaacctgacccgggaccacctggacttccacggcacgatggaagagtacttcgcggcg
aaggtactactgttccagggcagcggtggcccggctcccaaattcgcggtcatcaacgcg
gacgactcctggggcaagcaaatccccctgcagccggagaccaagcggctgacctatggc
ctcaagaacaatgccgatgtgaaggccgagaacattgacgcgggcttccacggtctgcgg
ttcgacgtgcgctttcccggtggccggcagcatatcgcgtccaagctttgcgggctgatc
aacgtctacaacctgctgggcgcatttgccgtggggctgagcctgggcctgacggcgcag
cagatcgccgagggcctggagtcctgcacggcggtgcccggacgatttgagcgcgtggat
gccgggcagccgttcctggtcgtagtggactacgcccacaccgacgatgccctgcgaaac
actatcgccaccgcgcgggcgctgaatcccaagcgcgtaatcacgctgttcggctgcggc
ggcgacagggaccgggccaagcgtccactgatgggccaggccgcggctgagatgagcgac
tatgtggtggtcacaagcgacaacccgcggagcgaggatcctctcagcatcatcaacgac
gccctggtcggcgtacggcgctttgacaccaaacacgtcgtggaacccgaccgcgagaaa
gcgatccggctggccatttccgaggcccgcccgggtgatattgtcctgctggccggcaag
ggacacgaaacctaccaggtgctgcgcgaccggacgatcgattttgacgaccgcgtggca
gcccgccgggtgttggaaggctttgggtatgtaccgaagagcgaggcgcgcgcatga
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