Paludibaculum fermentans: IRI77_17730
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Entry
IRI77_17730 CDS
T06895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pfer
Paludibaculum fermentans
Pathway
pfer01501
beta-Lactam resistance
pfer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_17730
01503 Cationic antimicrobial peptide (CAMP) resistance
IRI77_17730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfer03036
]
IRI77_17730
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_17730
01504 Antimicrobial resistance genes [BR:
pfer01504
]
IRI77_17730
Chromosome and associated proteins [BR:
pfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IRI77_17730
Transporters [BR:
pfer02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IRI77_17730
Antimicrobial resistance genes [BR:
pfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IRI77_17730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
HH_MFP_RND
BSH_CzcB
HH_CzcB
HH_YBHG
BSH_CusB
HH_AAEA_pHBA
RND-MFP_C
BSH_YhbJ
CzcB_C
Biotin_lipoyl
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
QOY91709
UniProt:
A0A7S7NYT0
LinkDB
All DBs
Position
4524913..4526100
Genome browser
AA seq
395 aa
AA seq
DB search
MTSEVEPTQTETPPEVRPANGAMRILSMISLTILAGLAALVFTGVRARSAATETLSHSAQ
DGAARRVSVVRPQLAGDQEELVLPASIQAYAEAPIYARTHGYLKRWYFDIGAHVKEGDLL
AEIETPEVDHQLAQARADLQSVQANLELARTTAARWNGLLARHAVSKQETDQAVSDLTAK
QAAVDASMANVRRLEELQGYEKVYAPFEGVITARQTDVGALIDAGSSPRELFHLASIRKL
RVFVAVPEVSSASVRNGAPVRLTADQFPNRVFQGVLVRNSSSIDPASRTLNVEVDIDNSS
GELLPGSYAFVHLRVPGAAKAWEIPSSALLFRAEGLRVAVVRGSRAELVPISIGRDFGAM
VEVNSGLRPDDEVVQSPSDSLITGTPVQIAKAAQK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgaagtggaaccaacccaaaccgagacaccgcccgaggtgcgccccgccaat
ggggcaatgcggatattgagcatgatttccctcacgatcctggccggactcgccgccctg
gtgttcactggcgtgcgcgcccgcagcgcggccaccgaaaccctgtcgcactcggcgcag
gatggcgcggcccggcgtgtctccgtggtccgcccgcaacttgccggcgaccaggaggaa
ctggtgctgcccgccagtattcaggcctatgcggaagctcccatctacgcgcgcacccat
ggctacctgaagcgctggtacttcgacatcggcgcgcacgtcaaggagggcgacctgctg
gcggagatcgagacgcccgaggtcgaccatcaactggcccaggcccgggccgacctccag
agcgtgcaagccaatcttgaactggcccgcaccactgcggcccgctggaacgggctgctg
gcccgccacgccgtgtcaaagcaggagaccgaccaggccgtcagtgacctcaccgccaag
caggccgccgttgacgcgagcatggcgaacgtgcggcgactggaagagctgcagggctac
gagaaagtctacgctccctttgaaggtgtcattaccgcgcgccagaccgacgtgggcgcc
ctgatcgacgccggatcctcgccgcgcgagctcttccacctggcgtccatccggaagctg
cgcgtcttcgtggcggttccggaggtctcatcggcctctgtgcgcaacggcgcgccggtg
aggctcactgccgaccagttcccgaacagggtgttccagggagtcctggtgaggaactcg
agctccatcgatccggcatcgcgcaccctgaatgtggaggtggacatcgacaactcctca
ggagagctgctgccgggctcctatgccttcgtccacctgcgtgtgcccggcgccgccaaa
gcctgggagatcccatcgagcgcgctgctgtttcgcgcggaaggcctccgggtcgcggtc
gttcgaggcagccgggccgagctggttcccatctccatcgggcgtgactttggagccatg
gtggaggtcaattcaggactgcggccggacgatgaggtggtccagtcgccgtccgattcg
ctgatcaccggcacgccggtccagatcgcaaaggcggctcaaaaatga
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