Paludibaculum fermentans: IRI77_21590
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Entry
IRI77_21590 CDS
T06895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pfer
Paludibaculum fermentans
Pathway
pfer01501
beta-Lactam resistance
pfer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_21590
01503 Cationic antimicrobial peptide (CAMP) resistance
IRI77_21590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfer03036
]
IRI77_21590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_21590
01504 Antimicrobial resistance genes [BR:
pfer01504
]
IRI77_21590
Chromosome and associated proteins [BR:
pfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IRI77_21590
Transporters [BR:
pfer02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IRI77_21590
Antimicrobial resistance genes [BR:
pfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IRI77_21590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PUMA_CC
DUF5666
Myosin_tail_1
DUF1192
Motif
Other DBs
NCBI-ProteinID:
QOY85417
UniProt:
A0A7S7SH15
LinkDB
All DBs
Position
complement(5485762..5486859)
Genome browser
AA seq
365 aa
AA seq
DB search
MKRINILTLASLLVSMAAVWAQTSDLVPVVAKPVSQSVELPGEFQPFLSVAVHAKVRGYV
EKVLVDRGSFVKQGQPLVELSAPEMKAQIAEAESKVQSAESERLQAEAQLAAAESTAERM
AKAAETPGAVAGNEVVLAKKQVDALKALVRAKQQASQAAASAVSAQKDLESYLRIAAPFD
GVVTERLVHPGALVGPGSDPVLLSIQQLARLRLVVAVPEQYTGAISNGARVDFKVPAFPE
RTFAGTVARSAHMLDSATRTMPVELDVANGDASLAPGMYPSVKWPVRRPKPSLFVPKTSV
VTTTERTFVVRSNGGRAEWVDVKKGAADGDMVEVMGRLQAGDQVVRRATDEMRDGTPLPG
RAAGK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcattaacatcctgaccttggcctccctcctcgtgtcgatggcggccgtctgg
gcgcagaccagtgacctcgtgcccgtagtggccaagccggtctcgcagtccgtcgagcta
ccgggcgagttccagccgttcctcagcgtagccgtgcatgccaaggtccgcgggtatgtg
gagaaggtgttggtggatcgcggcagcttcgtgaagcagggccagccgctagtggagctc
tccgcgccggagatgaaggcccagattgccgaggcggaatccaaggtgcagtcggccgaa
tccgagcggcttcaggcagaggcgcagctcgccgcggccgagagcacggcggagcgtatg
gccaaggccgccgagactccgggtgccgttgcgggcaacgaagtggttctcgcgaagaaa
caggtggacgcgctgaaagccctggtgcgggccaagcaacaggcgagccaggctgcggct
tccgccgtgagtgcgcagaaggatctggagtcgtacctgcggatcgccgcgccgttcgac
ggtgtcgtgacggaacggttggttcatccgggagcgctggtgggccccggcagtgatccg
gttttgctgagtatccagcagttggctcggctgcgcctggtggtggccgtgccggagcag
tacacaggcgccatttcaaacggagccagggtcgatttcaaggtgccggcatttccagag
aggacgtttgcggggacggtggctcgctcagcccatatgctcgactccgctacccgcacc
atgcccgtcgaactggatgtcgctaacggcgatgcctcgctggcgcccggcatgtacccg
tcagtgaagtggccggtccgccgccccaagccgtctctgtttgttccgaagaccagtgtc
gtcaccacgacggaacggaccttcgtggtgcgcagcaatggcggccgcgccgaatgggtg
gatgtgaagaagggagcggccgacggggacatggtggaagtgatgggccgcctgcaggcc
ggtgaccaggtggtgcgccgcgccacggatgagatgcgcgacgggactccgctgcccggg
cgtgcggcaggtaagtag
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