Paludibaculum fermentans: IRI77_30055
Help
Entry
IRI77_30055 CDS
T06895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pfer
Paludibaculum fermentans
Pathway
pfer01501
beta-Lactam resistance
pfer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_30055
01503 Cationic antimicrobial peptide (CAMP) resistance
IRI77_30055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfer03036
]
IRI77_30055
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_30055
01504 Antimicrobial resistance genes [BR:
pfer01504
]
IRI77_30055
Chromosome and associated proteins [BR:
pfer03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IRI77_30055
Transporters [BR:
pfer02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IRI77_30055
Antimicrobial resistance genes [BR:
pfer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IRI77_30055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
BSH_CusB
YknX_C
HH_EMRA
BSH_YhbJ
Biotin_lipoyl
Beta-barrel_RND
HH_YBHG
BSH_YknX
BSH_LcnD
GAS
T4_Tape_measure
Motif
Other DBs
NCBI-ProteinID:
QOY86979
UniProt:
A0A7S7SJ95
LinkDB
All DBs
Position
complement(7592004..7593206)
Genome browser
AA seq
400 aa
AA seq
DB search
MSRAFSLALLLISILLAAGCGRKDPQAAKATTAPDPISIKTAPAVAQTVERAIMATGSLQ
PDETTTVSSEVPGRITKLNYDFGQMVKKGQILAELDTQELALQVERARGSLAQAMARVGI
DPTKEEIPDTTPQTRQAKAQMEDAKSKYENAAKLVKTGDISTERFTELEKAYRARWAALE
ATQDELRTQLAAIRSLRADVKLAEKRLRDATVVAPFDGIVQMKHVSPGQYIKENVAIYTV
VKATPLRLRAEIPESAVSEIHVGTTLEFTTEAVPNATFKAVVRELNPALDNRSRTLTAEA
RLLNGDARLKPGSFVQVRLVTNKAYPVIAVPKDAVYTVAGLNKFFSIENGKAVEHKIPQI
LGSNGMVEMPEGTIAAGAQVAVSNLPMLTNGAPVRTAGQN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgccttttccctggcccttcttctcatttccatcctgttagccgccggctgc
ggcaggaaagatccgcaagcagccaaagcgacgacagcaccagaccccatttcgatcaag
accgcacccgctgtggcacagacggtggaacgcgccatcatggcgacgggttcgctgcag
cccgatgagacgacgacggtgagttccgaggtgccgggccggatcacgaagctgaactac
gactttggacagatggtgaagaagggccagatcctggccgagctggatacgcaggagttg
gcgctgcaagtggagcgcgcgcgcggatcattggcgcaggcgatggcgcgggtgggcatc
gatccaacgaaggaagagattccggacacgacgccgcagacccgccaggccaaggcgcag
atggaagacgcgaaatcgaaatatgagaacgcggccaagctggtgaagacgggcgacatc
agtacggagcggtttactgagctggaaaaagcgtatcgggcccgatgggcggctttggaa
gcgacgcaggacgaactgcgcacgcaactggcggcgatccgctcgctgcgggccgatgtg
aagctggccgagaaacggctgcgggacgcgacggtggtggctccgtttgatggcatcgtg
cagatgaagcacgtgtcgccgggccagtacatcaaggaaaacgtggcgatctacacggtg
gtgaaggcgacgccgctgcggctgcgggcggagatcccggagtcggctgtgtctgagatc
catgtgggcacgacgctggagttcacgacagaagcggtgccaaacgcgacgttcaaggcc
gtggtgcgggagttgaatccggcgctggacaaccgttcgcggacgctgacggcggaagcg
cggctgctgaatggcgatgcgcggctgaagccgggttcgttcgtgcaggtgcgcctggtg
acgaacaaagcctacccggtgatcgcggtgccgaaggatgcggtctacacggtggccgga
ctgaacaagttcttctccatcgagaacggcaaggcggtggagcacaagatcccgcagatt
ctgggttccaacggaatggtggagatgccggaaggcaccatcgcggccggcgcccaggtg
gcggtctccaatctgccgatgctgacgaacggcgcgccggtgcggacggccggtcagaac
tag
DBGET
integrated database retrieval system
