KEGG   Plasmodium falciparum HB3: PFHG_00251
Entry
PFHG_00251        CDS       T01052                                 
Name
(GenBank) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFHG_00251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfh03019]
    PFHG_00251
Messenger RNA biogenesis [BR:pfh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PFHG_00251
SSDB
Motif
Pfam: ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_15 AAA_23 Arf AAA_18 RNA_helicase AAA_21 MMR_HSR1 Dynamin_N ATP-synt_ab AAA_22 AAA_25 AAA_24 Zeta_toxin FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: KOB58505
UniProt: A0A0L7K5Z3
LinkDB
AA seq 176 aa
MNQIVINNLNYNYYNGIQRTRIKALQNVNLCFERGMRILVCGKNGAGKSTLLSIIAGKKV
KMIKKIKRNEVLIFNKQAFHDTDISNKIGYVGEWWSEEYAMNISIKDFCFNYEYTKRYKN
LLKLFELDENKIISNLSKGERKKVQIMVNIIVRKDIYIFDEATESLDLVSRKLLLE
NT seq 531 nt   +upstreamnt  +downstreamnt
atgaaccaaatagtaattaataatttaaattataattactataatggaatacaaagaaca
cgtattaaggctttacaaaatgtcaacttatgttttgaaaggggtatgaggatattggtt
tgtggaaaaaatggtgcaggaaaaagtacattattgagtatcatagcaggaaaaaaggta
aaaatgattaagaaaataaagagaaacgaagtactaatatttaataaacaggcttttcac
gacacggacatatctaataaaataggttatgttggagaatggtggagtgaagagtatgcc
atgaacattagcataaaagatttctgcttcaattatgaatatactaaaagatacaaaaat
ttattaaaattattcgaactagacgaaaataaaattatatcaaatctttccaaaggtgaa
agaaaaaaggttcaaatcatggttaatataattgtgagaaaagatatttatatatttgat
gaggctactgaatctctggatttggtatcaaggaaattattactagagtaa

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