Pandoraea fibrosis: PI93_010110
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Entry
PI93_010110 CDS
T06385
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pfib
Pandoraea fibrosis
Pathway
pfib01501
beta-Lactam resistance
pfib01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PI93_010110
01503 Cationic antimicrobial peptide (CAMP) resistance
PI93_010110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfib02000
]
PI93_010110
01504 Antimicrobial resistance genes [BR:
pfib01504
]
PI93_010110
Transporters [BR:
pfib02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PI93_010110
Antimicrobial resistance genes [BR:
pfib01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PI93_010110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF3561
Motif
Other DBs
NCBI-ProteinID:
QHF12948
UniProt:
A0A5E4Y5X8
LinkDB
All DBs
Position
2253759..2256932
Genome browser
AA seq
1057 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIVIMLAGALSILKLPVSQYPPIAPPSVQITATYPGASAQTVQDT
VTQVIEQQMNGIDNLEYMSSTSDGSGTAQITLTFSQGTNPDIAQVQVQNKLQLATPLLPQ
QVQQQGIKVAKATKNFLLVIGAYSDDGQMTDIDLANYIAANVQDPISRVNGVGQVQLFGS
QYAMRVWVDPQKLNGYNLTVIDVSNAISAQNVQISAGELGGAPAVKGQQLNATVTAQSRL
QTPEQFRKILLKVNKDGSQVRLGDVARIELGGESYQVVARYNGKPAAGLAITLATGANAL
QTATAVKQAVTELEPYFPAGMKVDYPYDTTPFVKISIEEVIKTLIEGIVLVFLVMYLFLQ
NLRATIIPTIAVPVVLLGTFGIMGAAGFSINTLSMFGLVLAIGLLVDDAIVVVENVERVM
AEEGLSPKEATKKAMDQIVGALVGVALVLSAVFVPMAFFGGSTGAIYRQFSLTIVAAMAL
SVLVAIVLTPAMCATILKPIKKGEVHEKRGFFGWFNRTFDKGSKKYQGQVERILKRSTPL
VIVYVVIVAAVGFLFVRMPTAFLPDEDQGYFFNLVQLPPGATQERTLDVMKQVEKHYLEK
EKDAVRSIFTVTGFGFNGRGQNVGLAFTMLRPWEDRQSSDLKVQAVIARSYQAFASVKDA
MIFAINPPSVPELGNAGGIDFELQDRAGLGHDALMAARNQLLGLAAKNPNLANMRPNGLD
DTPQYKVDVDEEKAAALGLSIADVYTTLSASWGSSYVNDFIDRGRVKKVYVMSEAKDRML
PQDINKLYVRNASGTMVPFSAFATGKWTYGSPRLERYNGVPAVEIQGMPAPGKSSGDAMK
AVEEIAKQLPAGIGLEWTGLSFEERISGSQAPALYAISILIVFLCLAALYESWSIPFSVI
LVVPLGVLGALLAATLRGLSNDVYFQVGLLTTVGLSAKNAILIVEFAKDLQEQGRTLMEA
TMEAVRLRLRPILMTSMAFILGVLPLAISNGAGSASQHAIGTGVIGGMLAATFLAIYYVP
VFFVMVRKRFAHEDLDTVEHPELRHEQPDAGPAKEGN
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcgcccgatttttgcgtgggtgatcgcgattgtcatcatg
ctggccggtgcgctttcgattctgaagctcccggtctcgcaatatccgcccatcgcaccg
ccttcggtgcagatcaccgcgacttacccgggcgcttcggcgcagaccgttcaggatacg
gtcacgcaggtgatcgagcagcagatgaacggtatcgacaacctcgagtacatgtcgtcg
acgtctgacggctcgggtacggcacagatcacgctgaccttctcgcagggcacgaacccg
gacatcgcacaggtgcaggtgcagaacaagctgcaacttgccacgccgctgctgccgcag
caggtgcaacagcagggtatcaaggtggccaaggcgaccaagaacttcttgctggtgatc
ggtgcgtattccgacgacggtcagatgaccgacatcgaccttgccaactacatcgccgcc
aacgtgcaggacccgatcagccgtgtgaacggtgtgggtcaggtgcagctcttcggttcg
cagtacgcgatgcgtgtctgggtcgatccgcagaaactgaacggctacaacctcaccgtc
atcgacgtttcgaacgccatttcggcgcagaacgttcagatttcggcgggtgagttgggc
ggtgcaccggcagtgaaggggcaacagctcaatgccaccgtgacggcacaaagccgtctg
caaacgccggagcagttccgcaagattctgctcaaggtcaacaaggacggctcgcaagtg
cgtctgggtgacgtggcacgtatcgagctgggcggtgagtcgtatcaggtggtggcacgc
tataacggcaagccggccgccggtctggccattacgctggccacgggcgcgaacgcgctg
caaaccgcgacagcagtcaagcaggccgtcaccgagctggagccgtacttcccggcgggc
atgaaggtcgactacccctacgacaccacgccgttcgtgaagatctcgatcgaggaagtg
atcaagaccctcatcgaaggtatcgtgctcgtgttcctggtgatgtatctgttcctgcaa
aatctgcgggcaacgatcatcccgacgattgccgtgccggtcgtgttgctggggacgttc
ggcatcatgggcgcggcgggcttctcgatcaacaccttgtcgatgttcgggctggtgctg
gccattggtctgctcgttgacgatgccattgtggtggtggaaaacgtcgagcgggtgatg
gccgaagagggcttgagtccgaaggaagcgacgaagaaggcgatggaccagatcgtcggc
gcgctggtgggcgtggcgctcgtgctctcggcggtgttcgtgccgatggcgttcttcggc
ggctcgacgggggccatctatcgtcagttctcgttgacgatcgtggcggccatggcgttg
tcggtgctggtggctatcgtgctcacgccggccatgtgcgcgacgattctcaagccgatc
aagaagggcgaagtgcacgagaagcgcggcttcttcggctggttcaaccgcacgttcgac
aagggctcgaagaagtatcagggtcaggtcgagcggattctgaagcgcagcacgccgctc
gtgatcgtatatgtcgtgatcgtggcggcggtgggcttcctgttcgtgcgcatgccgaca
gcgttcttgccggacgaagatcagggctacttcttcaacctggtgcaattgccgccgggc
gcgacgcaagagcgcacgctcgacgtgatgaagcaggtcgagaagcactacctcgagaag
gaaaaggacgccgtgcgttcgatcttcacggtgacgggcttcggctttaacggccgtggt
cagaacgtgggtctcgcgttcacgatgttgcgtccgtgggaagaccgtcagtcgtcggat
ctgaaggtgcaggcggtgatcgcgcggtcgtaccaggccttcgcgagcgtgaaggacgcc
atgatcttcgcgatcaacccgccgtcggtgcctgaactgggtaacgcgggcggtatcgac
ttcgaactgcaggatcgcgcaggcctgggccacgacgcgttgatggccgcacgtaaccag
cttctcggattggcggcaaagaatccgaatctggcgaacatgcgtccgaacggtctcgac
gacacgccgcagtacaaggtggacgtcgacgaggaaaaggccgctgcactgggtctgtcg
attgccgacgtgtacaccacgctctcggcctcgtggggttcgtcctacgtgaacgacttc
atcgaccgtggtcgtgtgaagaaggtgtacgtgatgtcggaggcgaaggaccgcatgctg
ccgcaagacatcaacaagctgtatgtgcgcaacgcgagcggaaccatggtgccgttctcg
gccttcgcgaccggcaagtggacttacggctcgccgcgtctggagcgttacaacggtgtg
cctgcggtggaaatccaggggatgccggcaccgggcaagtcgtcgggtgacgccatgaag
gccgtggaggaaatcgccaagcaactgccggcgggtatcggtctggagtggacggggctg
tcgtttgaagagcgcatttcgggctcgcaggcaccggcgctgtatgccatctcgatcctg
atcgtgttcttgtgtctggccgcgttgtatgaaagctggtcgattccgttctcggtgatt
ctggtggtgccgctgggtgtgttgggcgcactgcttgcagcgacgctgcgtggattgtcg
aacgacgtgtacttccaggtgggtctgctgacaaccgtgggtctgtcggcgaagaacgcg
attctgatcgtggaattcgccaaggatctgcaagagcagggccgcacgctgatggaagcg
acgatggaagcggtgcgactgcgtttgcgcccgattctgatgacgtcgatggcgttcatt
ctcggggtgttgccgctcgcgatctcgaacggtgccggctcggcttcgcagcacgctatc
ggtaccggcgtgatcggcggtatgctggcggcgacgttcctcgcgatctactacgtgccg
gtcttcttcgtgatggtgcgcaagcgcttcgcccatgaagatctggataccgtggagcat
ccggaattgcgtcatgagcaaccggacgccggccccgccaaggaaggaaactga
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