Pandoraea fibrosis: PI93_013610
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Entry
PI93_013610 CDS
T06385
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00020
Citrate cycle (TCA cycle)
pfib00785
Lipoic acid metabolism
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01120
Microbial metabolism in diverse environments
pfib01200
Carbon metabolism
pfib01210
2-Oxocarboxylic acid metabolism
Module
pfib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PI93_013610
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PI93_013610
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PI93_013610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QHF13562
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All DBs
Position
3069017..3071878
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AA seq
953 aa
AA seq
DB search
MSLMEQFQANSYLFGGNAPYVEELYESYLDNPASVPDNWRQYFDALQNVPAVDGSNANDV
AHAPIVESFAQRAKANAFVSRAGASDLAVARKQVHVQSLVAAYRFLGARWANLDPLKRQE
RPAIPELEPAFYDLTEADMDSVYSAENTYFGFEQASLRDLLKALRDTYCGSIGAEYMYIS
DPVQKRWWQERLEKVRATPNFTAEKKKHILERLTAAEGLERYLHTKFVGQKRFSLEGGES
FIVAMDELVHHAGAKGVQEIVIGMAHRGRLNVLVNTLGKMPADLFAEFEGKHVDDLPAGD
VKYHKGFSSDVSTSGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGEADAASVLPVQV
HGDAAFAGQGVVMETLNLAQTRGYGTHGTVHIVINNQIGFTTSDPRDARSTTYCSDVVKM
IEAPVLHVNGDDPEAVVLAMQLALEFRQEFKKDAVVDIVCYRKLGHNEQDTPAVTQPLMY
KKIAQHPGTRALYVEKLVTQGVITAEEGAGFVAAYRKAMDDGHHTVDPVLSNYKSKYAVD
WVPFLNKKWTDAGDTAVPLNELKRLAERITTIPANFKVHPLVEKVINDRRKMGEGEQPLD
WGMGEHLAFASLVSSGFAVRLTGQDSGRGTFTHRHSVLHDQNRERWNDGTYVPLQHVADG
QANFTVIDSVLSEEAVLGFEYGYSTAEPNTMVLWEGQFGDFANGAQVVIDQFISSGEVKW
GRVSGLTMLLPHGYEGQGPEHSSARIERYLQLCADTNMQVVQPTTPAQIFHLLRRQMIRQ
LRKPLIVFTPKSLLRHKEAVSDLSELAKGGFQTIIGETDASIDAKKVKRVVACSGRLYYD
LIARRREEKLNDVAIIRVEQLYPFPHKAFENELKKYENLAEVVWAQDEPQNQGPWFYIEH
HLIESMSAGQKLAYAGRAASASPAVGYYAKHYEQLKQLLDTAFGRLKGATVVQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatggaacaattccaagcgaactcgtacctcttcggtggcaatgccccctac
gtcgaagagctgtacgaatcgtatcttgataatccggcttccgtgccggacaactggcgc
cagtatttcgacgcgctgcaaaacgttcccgctgttgatggttccaacgccaacgacgtg
gctcacgccccgatcgtggagtcgttcgcccagcgcgccaaggccaatgccttcgtgtcg
cgtgcgggtgcgtccgacctggcggtggcacgcaagcaggttcacgtgcagtcgctcgtt
gccgcctaccgcttcctcggcgcacgctgggccaatctggatccgctcaagcgtcaggaa
cgtccggcaattcccgaactggaacccgcgttctacgacctgaccgaagccgacatggac
agcgtgtactcggcagagaacacgtacttcggtttcgaacaggccagcctgcgcgacttg
ctcaaggcgcttcgcgatacgtactgcggctcgatcggcgccgaatacatgtacatcagc
gatccggtgcaaaagcgctggtggcaagagcgtctggagaaggtgcgtgcaacgcccaac
ttcaccgctgaaaagaagaagcacatcctcgaacgcctgacggccgctgaaggcctcgag
cgttacctgcacaccaagttcgtcggccagaagcgcttctcgctcgaaggcggcgaatct
ttcatcgtggcgatggacgaactcgtccaccacgccggtgccaagggcgtgcaggaaatc
gtgatcggcatggcccaccgtggccgtctgaacgtgctggtcaataccctcggcaagatg
ccggcggacctgtttgccgaattcgaaggcaagcacgtggacgacctgccggccggtgac
gtgaagtaccacaagggcttctcgagcgacgtctcgacgagcggtggtccggtccacctg
tcgctggcgttcaacccgtcgcacttggaaatcgtgaacccggtggtcgaaggttcggcc
aaggcgcgtatggatcgccgcggcgaagccgatgcagccagcgtgttgccggtgcaagtt
cacggcgacgccgcgttcgcgggtcagggtgtcgtgatggaaacgctgaacctcgcgcaa
acgcgtggttacggcacgcacggcacggtgcacatcgtcatcaacaaccagatcggcttc
accacgtcggacccgcgcgatgcccgttcgacgacgtattgctcggacgtggtcaagatg
atcgaagcgccggtgctgcacgtgaacggcgacgatccggaagcggtcgtgctggccatg
caactggccctcgaattccgtcaggaattcaagaaggacgccgtcgtggatatcgtttgc
taccgcaaactgggccacaacgaacaagacacgccggctgtcacgcagccgctgatgtac
aagaagattgcccaacacccgggcacgcgcgcgctgtacgtcgaaaagctggtcacgcaa
ggcgtgatcacggccgaagaaggtgcgggcttcgtcgccgcctaccgcaaggccatggac
gacggccatcacaccgtcgatccggtgctctcgaactacaagagcaagtacgccgtcgac
tgggtgccgttcctgaacaagaagtggaccgacgccggcgatacggcggtgccgctgaac
gaactcaagcgtctggctgagcgcatcaccacgattccggcgaacttcaaggttcacccg
ctcgtcgagaaggtcatcaacgaccgtcgcaagatgggcgagggcgagcagccgctcgac
tggggtatgggtgagcacctggcgttcgcatcgctggtctcgtcgggcttcgctgtgcgc
ctgaccggtcaggattcgggccgcggcacgttcacgcaccgccactcggtgctgcacgat
cagaaccgcgaacgttggaacgacggtacctacgtgccgctgcaacacgtggccgacggt
caggccaacttcacggtgatcgactcggtgctgtccgaagaagccgtgctgggcttcgag
tacggttactcgaccgccgaaccgaacacgatggtgttgtgggaaggccagttcggtgac
ttcgccaacggtgcgcaggtcgtgatcgaccagttcatctcgagcggtgaagtgaagtgg
ggccgcgtgtcgggcctgacgatgctgctgccgcatggctacgaaggccagggtccggag
cactcgtcggcacgtatcgagcgctacctgcaactgtgcgccgatacgaacatgcaagtg
gtccagccgaccacgccggctcagatcttccacctgctgcgtcgtcagatgatccgccag
ctgcgcaagccgctgatcgtgttcacgccgaagtcgctgctgcgccacaaggaagctgtg
agcgatctgtcggaactcgcgaagggcggtttccagacgatcatcggcgaaaccgatgcg
tcgatcgacgccaagaaggtcaagcgcgtcgtcgcctgctcgggccgcctgtactacgac
ctgatcgcccgccgtcgcgaagagaagttgaacgacgttgcgatcatccgcgtggaacag
ctctatccgttcccgcacaaggcgttcgagaacgagttgaagaagtacgaaaacctcgcc
gaagtggtgtgggcccaggacgagccgcaaaaccagggtccgtggttctacatcgaacac
cacctgatcgaaagcatgagcgccggtcagaagttggcttacgcgggtcgcgcggcctcg
gcctcgcctgccgtgggctactacgccaagcattacgaacagctcaagcagttgctcgat
acggctttcggtcgcctcaagggcgcgaccgtggtgcagtaa
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