Pandoraea fibrosis: PI93_018785
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Entry
PI93_018785 CDS
T06385
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PI93_018785 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_018785 (nth)
Enzymes [BR:
pfib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PI93_018785 (nth)
DNA repair and recombination proteins [BR:
pfib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PI93_018785 (nth)
Prokaryotic type
PI93_018785 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QHF14473
LinkDB
All DBs
Position
4259360..4260004
Genome browser
AA seq
214 aa
AA seq
DB search
MNDAKRRALFETLQQLNPHPTTELEYTSPFELLIAVLLSAQATDVSVNKATRKLYAVANT
PAKMLALGEAGVSDYIKTIGLYRTKAKNVIATCQLLLDVHGGEVPRSREALEALPGVGRK
TANVVLNTAFGEDTIAVDTHIFRVANRTGLAPGKDPLAVELALERVTPREFKHDAHHWLI
LHGRYVCKARKPECWHCAIEPLCDFRPKTPAPKA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccaaacgccgtgccctgttcgagacgctgcaacagctcaatccgcatccg
acaacggagcttgagtacacgtcgcccttcgagttgctgattgccgtgctgctttcggcg
caggcaaccgacgtctcggtgaacaaggccacccgcaagctttacgccgtggcgaacaca
ccggcgaagatgctggcgctcggcgaggccggggtctccgactacatcaagaccatcggg
ctgtaccgcacgaaagccaagaacgtcatcgcaacgtgtcagttgctgctcgacgtccac
ggcggtgaggtgccgcgctcgcgggaagccctcgaagcgttgccgggcgttggccggaaa
acggcgaacgtggtgctcaacaccgcgtttggcgaagacacgattgccgtcgacacgcat
atcttccgggtggcgaaccgcacgggcctcgcccccggcaaggacccgctggcggtcgaa
ctcgcgctcgagcgcgtcaccccgcgcgagttcaagcacgatgcccatcactggctcatc
ctgcacggccgctacgtatgcaaggcgcgcaagcccgagtgctggcattgcgccatcgaa
cccctgtgcgacttccggcccaagacgcccgcaccgaaggcctga
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