Pseudomonas fitomaticsae: KJY40_15040
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Entry
KJY40_15040 CDS
T08740
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pfit
Pseudomonas fitomaticsae
Module
pfit_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfit02000
]
KJY40_15040
01504 Antimicrobial resistance genes [BR:
pfit01504
]
KJY40_15040
Transporters [BR:
pfit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KJY40_15040
Antimicrobial resistance genes [BR:
pfit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
KJY40_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UFP97400
LinkDB
All DBs
Position
complement(3356626..3359817)
Genome browser
AA seq
1063 aa
AA seq
DB search
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGTDLDNAQVQVQNRVTRTEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGQLGAPPAPNAQSFQLSVNTQ
GRLVSEEEFENIIIRAGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIEISNEVRGKMEELKKSFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLNPFDATKKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKGHDAPKDRFSRVLDKIFGGWLFRPFNRFFDRASHGYVGTV
RRVIRGSGIALFLYAGLMVLTFFGFSSTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI
KRMSDLALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGAL
NGQYAGIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEELYKETMNIIAKSHNVPE
LANLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVN
VQAEQQFRLESDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAA
PGYSSGQAEKAIEKLLKDELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNFVERSEARKAAKAQHLQKPLEAHQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcccaattcttcatttcacggccgatcttcgcagcggtgctgtcgctgctg
atcctgatcgccggtgcgatttcgctgttccagttgccgatcagtgaatacccggaagtc
gtgccaccgaccgtggtggtgcgtgccaacttcccgggcgccaacccaaaagtcatcggt
gaaaccgtggcggctcctctggagcaagccatcaccggcgtcgagaacatgctgtacatg
tcctcgcagtccaccgccgacggcaagatcaccctgaccatcaccttcgccctgggcacc
gacctggacaacgcgcaggtgcaagttcagaaccgtgtgacccggaccgagccgaaactt
ccagaagaagtgacgcgtatcggtatcaccgtcgacaaggcatcgcccgacctgaccatg
gttgtgcatttgacctcgccggacaaacgctacgacatgctgtacctgtccaactacgcg
atcctcaacatcaaggatgagctcgctcgcctcggtggtgtcggtgacgtgcagctgttc
ggtatgggcgattactcgctgcgtgtatggctcgacccgaacaagaccgcttcgcgcaat
ctgactgcgactgatgtggtgaccgcgattcgcgagcagaaccgtcaggtggccgccggc
caactgggcgcgccccctgccccgaatgcccagagcttccagctgtcggtcaacactcag
ggccgtctggtctccgaggaagagttcgagaacatcatcattcgggcaggcgataacggt
gaaatcacgcgtctgaaagacatcgcccgcgttgaactgggttccagccaatatgccctg
cgctcgttgctgaacaaccagccggccgtagcgatcccgatcttccagcgtcctggctcc
aacgccatcgaaatctcgaacgaagttcgcggcaagatggaagaactgaagaaaagcttc
ccgcaaggcatggactacagcatcgtctatgacccgacgatcttcgtgcgcggctccatc
gaggcggtggttcacaccctcttcgaagcactgattctcgtggtactggtggtgattctg
ttcctgcagacctggcgcgcctcgatcattccgttggtggcggtgccggtatcgttgatc
ggtacgtttgcggtgatgcacctgttcggcttctcgctcaacgcgctgtcgctgttcggc
ctggtactggcaatcggtatcgtggtggacgacgccatcgtggtggtggagaacgtcgag
cggaacattgaactggggctcaaccccttcgatgcaaccaaaaaggccatgggcgaagtg
accggcccgatcattgccacggcgctggtgctgtgtgcggtgttcgtaccggcggcattc
atctcgggcctcaccggtcagttctacaagcagttcgcactgaccatcgcgatttcgacc
gtgatctcggctttcaactcgctgaccctgtcgccagcgctggccgctgtgttgctcaaa
ggtcacgacgcaccgaaagaccgcttctcgcgagtgctggacaagatcttcggtggctgg
ctgttccgtccgttcaaccgcttcttcgaccgcgccagtcatggctacgtcggcaccgtg
cgccgggtcatccgtggcagcggcatcgccctcttcctgtacgcaggcctgatggtgctg
accttcttcggcttctccagcacgccgaccggtttcgtacccggccaggacaagcaatac
ctggtggccttcgcgcaactgccggacgccgcgagcctggaccgtaccgaagacgtgatc
aaacgcatgtccgacctggcactgaaacaaccgggcgtggaaagcgccgtggcgttcccg
ggcctgtcgatcaacggcttcaccaacagcccgaacgccggcatcgtgttcgtgaccctg
aaaccgttcgacgagcgtaaagacccgagcatgtccgccggtgcgattgccggcgccttg
aacggccagtacgccgggattcaagaagcctacatggcgatcttcccgccgccgccggta
cagggtctgggcaccattggtggtttccgcctgcaaatcgaagaccggggcaacctgggc
tacgaagagctgtacaaggaaaccatgaacattattgccaagagccataacgttccggaa
ctggccaacctgtttaccagctacaccgtaaacgtgccgcaggtcgatgccgccatcgac
cgggaaaaagccaagacccacggcgtggccgtcagcgacatcttcgacaccctgcagatc
tacctgggttcgctgtatgccaacgacttcaaccgcttcggtcgtacctatcaggtcaac
gttcaggctgaacagcagttccgccttgaatccgaccagatcggccaactgaaagtacgc
aacaacaaaggcgaaatgatcccgctggcgaccttcatcaaggtcagcgacacttcgggc
ccggatcgcgtgatgcactacaacggcttcatcaccgctgaaatcaacggtgcggcagct
ccgggctacagctctggccaggccgaaaaagccatcgagaaactgctcaaggatgaactt
ccgaacggcatgacctacgagtggaccgacctgacctaccagcagattctgtccggcaac
accgcgctgttcgtgttcccgctctgcgtactgctggccttcctggtgctcgcggctcaa
tacgaaagctggagcctgccactggcggtgatcctgatcgtaccgatgaccctgctgtcg
gccatcactggtgtgatcatctctggcggcgacaacaacatcttcacccagatcggcttg
atcgtactggtgggacttgcctgtaagaacgcgattctgatcgtcgagttcgccaaggac
aaacaggaggaaggcctcgatccgctggccgccgtactggaagcctgccgtctgcgtctg
cggccgatcctgatgacttcgttcgcgttcatcatgggtgtggtgccactggtgttctcc
agcggtgccggtgccgagatgcgtcacgccatgggtgtggctgtgttctccgggatgctc
ggtgtgaccttcttcggtctgctgctgacccccgtgttctatgtgctgatccgcaacttc
gtggagcgcagcgaagcgcgcaaagcggccaaggcgcaacatcttcaaaagccactggag
gcgcaccaatga
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