Pseudocercospora fijiensis: MYCFIDRAFT_88404
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Entry
MYCFIDRAFT_88404 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03420
Nucleotide excision repair
pfj04111
Cell cycle - yeast
pfj04120
Ubiquitin mediated proteolysis
pfj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MYCFIDRAFT_88404
04120 Ubiquitin mediated proteolysis
MYCFIDRAFT_88404
09124 Replication and repair
03420 Nucleotide excision repair
MYCFIDRAFT_88404
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
MYCFIDRAFT_88404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfj04121
]
MYCFIDRAFT_88404
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_88404
Enzymes [BR:
pfj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
MYCFIDRAFT_88404
Ubiquitin system [BR:
pfj04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
MYCFIDRAFT_88404
Multi subunit type E3
SCF complex
Ring finger protein
MYCFIDRAFT_88404
Cul2 complex
MYCFIDRAFT_88404
Cul3 complex
MYCFIDRAFT_88404
Cul4 complex
MYCFIDRAFT_88404
Cul7 complex
MYCFIDRAFT_88404
Cul8 complex
MYCFIDRAFT_88404
Cul9 complex
MYCFIDRAFT_88404
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
MYCFIDRAFT_88404
TCR (transcription coupled repair) factors
Cul4-CSA complex
MYCFIDRAFT_88404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
19342698
NCBI-ProteinID:
XP_007927826
JGI:
88404
UniProt:
M2YXN9
LinkDB
All DBs
Position
Unknown
AA seq
115 aa
AA seq
DB search
MADVEMTDAAPKVKKAGPSTGDTDGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLC
IDCQANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtggagatgacggacgctgcaccaaaagtcaagaaggcgggaccaagcaca
ggcgatacagatggcaagaagagattcgaagtgaagaagtggaacgcagtcgcgctctgg
gcctgggacatcgttgttgacaactgcgccatctgccgcaaccacatcatggacctgtgt
atcgactgtcaagcaaatcaagcttctgccacgagcgaggagtgtacggtcgcttggggt
atctgcaaccacgccttccacttccactgcatttctcgatggctcaagacacgtcaagta
tgcccgcttgacaatcgcgactgggaatttcagaagtacggacgatga
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