Pseudomonas frederiksbergensis: PFAS1_24885
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Entry
PFAS1_24885 CDS
T04786
Name
(GenBank) hypothetical protein
KO
K09123
cis-L-3-hydroxyproline dehydratase [EC:
4.2.1.171
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00330
Arginine and proline metabolism
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PFAS1_24885
Enzymes [BR:
pfk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.171 cis-L-3-hydroxyproline dehydratase
PFAS1_24885
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Gene cluster
GFIT
Motif
Pfam:
AcnX
AcnX_swivel_put
Motif
Other DBs
NCBI-ProteinID:
APV42385
LinkDB
All DBs
Position
complement(5284935..5286713)
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AA seq
592 aa
AA seq
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MPRPTSLTGRSLVAGAAQGALLFADVGLSFWGGVDPFSGEIIDRHHPLSGEHLAGRVLAI
PSGRGSCTGSSVLMELISNGHAPAALVLAEPDEILTLGVLVAQTIFERSLPVLCIGREAF
ATLRGKAFARVEASTVTLFEHLPGDAWQAFDSPLQTAEKTTAIELTEHDQALLYGEHGKA
AQVAMQIVLRMAELQGARSLVDVTQAHIDGCIYTGPASLRFAEQLVQWGAKVRVPTTLNS
ISVDQRRWRELGIDSALGVPASALGDAYMAMGAQLSFTCAPYLLDSAPKAGEQIVWAESN
AVVYANSVLGARTLKYPDYLDICIALTGRAPLIGCHLDAQRKASLQIELPVLAELDDAFY
PLLGYHIGALAGSRIPLVLGLEHSKPSLDDLKAFGAAFATTSAAPLFHIAGVTPEALDPA
QVLEANVPVPVEKIRLKDLLLSWHELNSAHDNRVDVVSLGNPHFSLSEFAHLARLCRGRH
KHPEVVLAITCGRAVLEQAREAGHVAVIEAFGATLVTDTCWCMLGEPVIPLAAKTLMTNS
GKYAHYAPGLVGRKVHFANLAECVDAACSATASGRLPTWLQSAASLESHAHV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggccaacctctctgaccggtcgcagcctggtcgccggcgccgcccaaggcgcc
ctgctgtttgccgatgtcgggctgagcttctggggcggggtcgatccatttagtggagag
atcatcgaccgtcaccacccactcagcggcgaacatctggccggccgggtgctggcgatt
cccagtggtcgcggttcgtgcaccggcagcagtgtgctgatggaactgatcagcaacggc
catgcgccggccgcactggtgctggccgaacccgatgagatcctgaccctgggcgtgctt
gtggcacagaccattttcgagcgttccctgccggtgctgtgcatcggccgggaggccttc
gccaccttgcgcggcaaggcctttgctcgggtcgaagcgtcaacggtgaccttgttcgaa
cacctgccgggcgatgcctggcaggcattcgacagtccgttgcagacagcagaaaaaacc
accgccatcgaactcaccgaacacgatcaggcgctgctctacggcgagcatggcaaagcc
gcgcaagtggcgatgcagatcgtcttgcgcatggctgaactgcaaggtgcgcgcagtctg
gtagacgtcacccaggcgcacatcgacggctgcatttataccggacctgcgagcctgcgc
ttcgccgaacaactggtgcagtggggagccaaagtgcgggtgccgaccaccctcaattcg
atttccgtcgaccagcgccgttggcgcgagttgggcatcgattcggcactcggcgtaccg
gccagcgccttgggcgatgcatacatggcgatgggcgcgcagctgagtttcacttgcgca
ccttacctgctcgacagcgcgccgaaggccggcgagcaaatcgtctgggccgaatccaac
gccgtggtgtatgccaatagcgtgctcggcgcacgcaccctgaaatacccggattacctg
gatatctgcatcgccctgaccggtcgcgcgcccctgatcggctgccatctggacgcgcaa
cgtaaagcgagtctgcaaatcgaattgccggttttagctgaactggacgatgccttctat
ccgctgcttggttaccacatcggtgccctggccggcagtcgaattccgctggtgctgggg
ctggaacatagcaagccgagcctggacgatttgaaagccttcggcgcggctttcgccacc
acctctgccgcgccgctgttccatatcgccggggtgaccccggaggcactcgacccggcg
caggtgctggaagcgaatgtccccgtgccggtggaaaaaatccgtctgaaggatttgctg
ctcagctggcacgaactcaacagtgcccacgacaaccgggtggatgtggtctctctaggc
aatccgcatttctccctcagcgaattcgcgcatctggcgcggctgtgtcgggggcggcac
aaacaccccgaggtggtgctcgccatcacctgcggtcgtgcggtgctggagcaggcccgc
gaggcgggacatgtcgcggtgatcgaagccttcggcgcgacactggtcaccgacacctgc
tggtgcatgctcggcgagccggtgatcccgttggccgccaaaaccttgatgaccaactcg
ggcaaatacgcccattacgcacccggcctggtgggccgcaaggtgcacttcgccaacctc
gccgaatgtgtcgacgccgcctgcagcgccacggccagtggtcgtttgccgacctggctg
caatcggccgcctcactggagagccacgcgcatgtttga
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