Pseudomonas frederiksbergensis: PFAS1_26480
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Entry
PFAS1_26480 CDS
T04786
Name
(GenBank) RND transporter
KO
K18300
outer membrane protein, multidrug efflux system
Organism
pfk
Pseudomonas frederiksbergensis
Module
pfk_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_26480
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_26480
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_26480
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PFAS1_26480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RFamide_26RFa
Motif
Other DBs
NCBI-ProteinID:
APV42681
LinkDB
All DBs
Position
5673244..5674665
Genome browser
AA seq
473 aa
AA seq
DB search
MSLKAFLPSLLVLALSACAVGPDYKTPATEPANITTATDGSAGQKNYDRSRFEGIWWQQF
EDPTLNQLVTQSLQGNRDLRVAFARWKAARAIRDDVSNDAMPTITSRASSDLAKGQIPGQ
TTKRVSSERYDLGLDMAWEIDLFGRIQRNLESADAEQQALEADLYQLQVSMIAELVDAYG
QLRGAQLREKIALANLNNQQESSKITVSLRDAGVGDQLDVVRADARLASVEASVPQLQAE
QVRQKNRIATLLGERPDKLTVDLSPKDLPAIAKALPIGDPGELLQRRPDILSAERKLASA
TARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLR
GADADAEGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAEIRYR
EGTADFLVLLDAQRERLAAEDTQAQAEVDLYRGIVAIYKALGGGWQPETVASK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgaaagccttcctgccgagccttctggtactggccctgagtgcctgtgccgtc
ggcccggactacaagactccagccactgagccggccaacatcaccaccgccaccgatggc
agcgccggtcagaagaactacgaccgctcgcgtttcgaaggcatctggtggcagcagttc
gaagacccgaccctcaatcagttggtgactcaatcgctgcaaggcaaccgtgatttgcgc
gtggccttcgctcgctggaaagcggcccgggcgattcgcgatgacgtcagcaatgacgcc
atgccaaccatcaccagccgggccagcagtgacctggccaagggtcagattccgggccag
accaccaaacgggtcagtagcgaacgctacgacctgggcctcgacatggcgtgggagatc
gacctgtttgggcgtatccagcgcaacctggaatccgctgacgccgaacagcaagcgctc
gaagccgatctgtaccaactgcaagtctcgatgattgctgaactggtggatgcctacggt
caactgcgcggtgcgcagctgcgggaaaagatcgccttggccaacctgaacaaccagcag
gaatcgagcaagatcaccgtcagcctgcgtgatgccggcgtcggcgatcagctcgacgtg
gtccgcgccgatgcacgcctggcatccgtcgaagccagcgtgccgcaattgcaggccgaa
caggttcggcagaaaaaccgcatcgccaccctgctgggtgaacgtccggacaagctgacc
gtcgacctgagtccaaaagatttgccggcgatcgccaaggccctcccgatcggtgatccg
ggtgaactgctgcaacgtcgcccggacattctcagcgccgagcgcaaactggcctccgcc
accgcccgaatcggcgtggccaaggctgatttgttcccacgggtcagcctcagcggtttc
cttggcttcaccgccgggcgcggttcgcagatcggttcctcggcggccaacgcctgggca
ctgggcccaagcattacctgggccgcgttcgaccttggcagcgtgcgcgcccgtctaagg
ggtgccgatgcagatgccgaaggcgccctggcgacctacgaacagcaagtcctgttggcg
ttggaagaatcggaaaacgccttcagcgactacggcaaacggcaacaacgcctgatctca
ctgatccgtcagagtgagtcgagccgcgccgctgccgacctggcggaaattcgctaccgc
gaaggcacggcggacttcctcgtcctgctcgatgcccagcgtgagcgtctggcggcagaa
gacactcaggcccaggccgaagtcgatctgtatcgcggcattgtcgcgatctacaaagcc
ctgggcggtggctggcaaccggagacggtcgccagcaagtaa
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