Pseudomonas frederiksbergensis: PFAS1_26965
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Entry
PFAS1_26965 CDS
T04786
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk01501
beta-Lactam resistance
pfk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFAS1_26965
01503 Cationic antimicrobial peptide (CAMP) resistance
PFAS1_26965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_26965
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_26965
Transporters [BR:
pfk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PFAS1_26965
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFAS1_26965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ParB_C
Motif
Other DBs
NCBI-ProteinID:
APV42772
LinkDB
All DBs
Position
5783053..5786151
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTVDES
VVSLIEEELNGADHLLYFESQSSLGSATITATFQPGTDPEMAQVDVQNRLKVVESRLPQA
VTQQGLQVEKVSAGFLLLITLTSSDGKLDDVALSDYLARNVMNEIKRLDGVGKAQLYGAE
RAMRIWIDPQKLIGFNLTPADVNAAIVAQNAQVSAGSIGDLPTRTTQEITATILVKGQLS
TPEEFADIVLKANPDGSTVRIKDVARVEIGSQEYQFSTRLNGKPSTAVSVQLAPGANALS
TATLVRAKMDELARYFPAGVEYKIPYDTSPFVKVSITKVVYTLGEAMLLVFAVMFLFLQN
IRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
TEGLSPKEATRKAMKQITGAIIGITLVLVAVFIPMAFMQGSVGVIYRQFSLSMATSILFS
AFLALTLTPALCATLLKPIAKGEHHEKRGFFGWFNRRFEQLTESYQGWVAYALKRTGRYL
LIYGVLLIGLGVCFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVVEQIEAHNATEP
GVGDSTVILGFSFSGSGQNAALAFTTLKDWSDRGSDDSASSIADRANIALSQIRDAVAFA
VLPPPVDGLGTSSGFEFRLQDRGGLGHATLMQARSELLAGAEKSPILMNVRESALAEAPQ
VQLEVDRKQANALGVSFADIGNVLSTAVGSAYINDFPNQGRMQRVVVQAEGDQRSQVADL
LKIHVRNSAGKMVPLSAFVQAKWTQGPAQLTRYNGYPAISISGEPSPGYSTGEAMAEIER
LVAQGPAGLGQEWTGLSLQERLSGSQAPILLGLSLLIVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVTLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKSLYDEGHDLVDATLQA
ARLRLRPIVMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVVFVPVFFVV
VMKLVRKRHKGI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttctttatcgatcgcccggtgttcgcctgggtggttgccctgttcatcctg
ttggccggcgccctggccattccacagttgccggtggcgcaataccccaacgtcgcgccg
ccgaaagtcgaaatctacgcggtgtaccccggtgcttcggcgcaaaccgtggacgaaagc
gtggtcagcctgatcgaggaagaactcaacggcgctgaccatctgctgtatttcgaatcc
cagagcagcctcggcagcgccaccatcaccgcgacgttccagccgggcactgacccggaa
atggcgcaggtcgatgtgcaaaaccgcctgaaagtggtcgagtcgcgtctgcctcaagcg
gtgacacaacagggtttgcaggtggagaaagtttccgccggtttcctgctgctgatcacc
ctcacctccagcgacggcaagctcgacgacgtggcgctcagcgattacctggcacgcaac
gtgatgaacgagatcaaacgtctggacggcgtcggcaaggcgcagttgtacggtgccgaa
cgggccatgcgaatctggatcgacccgcagaagctgatcggcttcaacctgaccccggcc
gacgtcaacgccgccatcgtcgcgcagaacgcgcaagtgtcagcgggcagcatcggcgat
ttgccgacccgcaccacccaggaaatcaccgcgaccattctggtcaaaggccagttgtcg
acgccggaagaattcgccgacatcgtcctgaaagccaatcccgacggttccacggtgcgc
atcaaagacgtggcgcgtgtcgagatcggcagtcaggaataccagttctccacccgcctg
aacggcaaaccatcgaccgccgtcagcgtgcaactggcaccgggcgccaatgccctgagt
actgccacgttggtgcgggcgaagatggacgaactggcgcgctacttcccggctggcgtg
gaatacaaaatcccgtacgacacctcgcccttcgtcaaagtctcgatcaccaaggtggtt
tacaccctcggcgaggcgatgttgctggtgttcgcggtgatgttcctgttcctgcaaaac
atccgctacacgctgattccgaccctggtggtgccggtggcgctgatgggcacctttgcg
accatgttggcgctggggttctcgatcaacgtgctgaccatgttcggcatggtgttggca
atcggcatcctggtggatgacgcgattgtggtggtggagaacgtcgagcgaatcatggcc
accgaaggcctgtcgcccaaagaggcgacgcgcaaggcgatgaagcagatcaccggggcg
atcatcggcatcacgctggtgctggtcgcggtgttcattccgatggcgttcatgcagggc
tcggtcggggtgatttaccggcagttctcgttgtcgatggccacctcgatcctgttctcg
gcgttcctcgccctgaccttgaccccggcgttgtgcgcgacgctgctcaagccgattgcc
aagggcgaacaccacgagaagcgcgggttcttcggctggttcaaccggcgcttcgagcaa
ctgaccgagagctatcagggctgggtcgcctatgcactgaaacgcacgggccgctacctg
ctgatctacggcgtgctgctgatcggattgggcgtgtgcttcagtcgcctgccctcctcg
ttcctgccggtggaggatcagggttacaccatcaccgacattcaactgccaccgggcgcg
agcaagaaccgcacggtgcaggtggtcgagcagatcgaagcccacaacgccactgaaccc
ggcgtcggcgacagcacggtgattctcggtttcagtttttccggtagcgggcagaacgcc
gcgttggcgtttaccacgctcaaggattggtctgaccggggcagcgacgactcggccagc
tccattgccgatcgcgccaacatcgcgttgagccagatcagggacgccgtggcgtttgca
gtactgccgccaccggtggatggccttggcacttccagcggtttcgagttccgcttgcag
gaccgtggcggcctcggccatgccacgctgatgcaggcgcgtagtgaactgctcgctggc
gccgagaaaagtccgatcctgatgaacgtgcgcgaaagcgccctggccgaagcgccgcag
gtgcaactggaagtcgaccgcaaacaggccaacgcgctgggcgtgtcctttgccgacatt
ggcaacgtgctgtccaccgccgtcggttcggcctacatcaacgacttccccaatcagggg
cggatgcagcgtgtggtggtgcaggctgaaggcgatcagcgcagtcaggtcgccgatctg
ctgaagattcacgtgcgcaacagtgccgggaaaatggtgccattgtcggccttcgtccag
gccaagtggacccagggtccggcgcaattgactcgctacaacggctacccggcgatcagc
atttccggtgaaccgtcgcccggttacagcaccggcgaagccatggcggaaatcgagcgt
ctggtggcgcaagggccggcggggttggggcaggaatggaccgggttgtcattgcaggaa
cgcttgtccggcagtcaggctccgatcctgctcggtttgtcgctgctgattgtgttcctg
tgtctggccgcgttgtatgagagctggtcgataccgacctcggtgctgctggtggtgccg
cttggcgtgctcggcgcggtactggccgtgaccttgcgcgggatgcccaatgacgtgttc
ttcaaggttggattgatcaccatcatcgggctgtcggcgaagaacgcgatcctgatcatc
gagttcgccaagagcctgtacgacgaaggccacgacttggtcgacgccacgctgcaagcc
gcgcgcctgcgactgcggccgatcgtgatgacgtcgctggcgttcattctgggtgtggtg
ccactggcgattgccaccggggccagttcagcgagccagcaagccatcggcaccggggtg
attggcgggatgatcacggcgacactggcggtagtgtttgtgccagtgttttttgtggtg
gtgatgaaactcgtgcgcaagcgccataagggtatctaa
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